RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 SSBP05455 408 aaKnown RBP eCLIP6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 GSNP06396 782 aa6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 VAV1P15498 845 aa6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 NASPP49321 788 aaPredicted RBP6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 CBX2Q14781 532 aaPredicted RBP6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 TMEM192Q8IY95 271 aa6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 CKAP2LQ8IYA6 745 aa6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 NUP43Q8NFH3 380 aa6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 NKD1Q969G9 470 aa6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 XYLT2Q9H1B5 865 aa6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 EFR3BQ9Y2G0 817 aa6.3□□□□□ -1.4
SNAPC3-201ENST00000380799 A0A1W2PQ27 194 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 A0A1W2PQ64 194 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 A0A1W2PQC6 194 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 A0A1W2PQD8 194 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 NUDT19A8MXV4 375 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 PPM1GO15355 546 aaPredicted RBP6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 IMPDH2P12268 514 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 CDK11BP21127 795 aaKnown RBP6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 BMS1Q14692 1282 aaKnown RBP6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 NR1I3Q14994 352 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 INTS3Q68E01 1043 aaKnown RBP6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 CWF19L1Q69YN2 538 aaKnown RBP6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 FAM129CQ86XR2 697 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 NLGN1Q8N2Q7 840 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 NAT16Q8N8M0 369 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 DSCC1Q9BVC3 393 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 NT5C1AQ9BXI3 368 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 ZNF408Q9H9D4 720 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 TNFRSF12AQ9NP84 129 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 LUC7LQ9NQ29 371 aaKnown RBP6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 GINM1Q9NU53 330 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 MINPP1Q9UNW1 487 aa6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 CDK11AQ9UQ88 783 aaPredicted RBP6.29□□□□□ -1.4
SNAPC3-201ENST00000380799 ANKRD62A6NC57 917 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 NCLP19338 710 aaKnown RBP6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 CTSKP43235 329 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 HLA-DQA1Q5Y7H0 255 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 CRTC3Q6UUV7 619 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 DBX2Q6ZNG2 339 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 IGDCC3Q8IVU1 814 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 SLITRK4Q8IW52 837 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 TMEFF1Q8IYR6 380 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 SMARCC1Q92922 1105 aaPredicted RBP6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 PWWP2AQ96N64 755 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 EPB41L4AQ9HCS5 686 aaPredicted RBP6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 AP5S1Q9NUS5 200 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 SUCOQ9UBS9 1254 aaKnown RBP6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 TBX22Q9Y458 520 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 MRVI1Q9Y6F6 885 aa6.28□□□□□ -1.4
SNAPC3-201ENST00000380799 OTOL1A6NHN0 477 aaPredicted RBP6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 PFKLP17858 780 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 ETFBP38117 255 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 MAPKAPK2P49137 400 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 TARBP2Q15633 366 aaKnown RBP6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 SDE2Q6IQ49 451 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 ZC3H14Q6PJT7 736 aaKnown RBP6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 CYP2R1Q6VVX0 501 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 ZNF662Q6ZS27 426 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 JAMLQ86YT9 394 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 CCDC144CPQ8IYA2 1237 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 C7orf61Q8IZ16 206 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 SLC9A7Q96T83 725 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 ANTXR1Q9H6X2 564 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 IMPACTQ9P2X3 320 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 PCDHA5Q9Y5H7 936 aa6.27□□□□□ -1.41
SNAPC3-201ENST00000380799 ZC3H12DA2A288 527 aaKnown RBP6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 BUB1BO60566 1050 aaPredicted RBP6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 CELA3BP08861 270 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 SOX9P48436 509 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 CAP1Q01518 475 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 KIR3DS1Q14943 382 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 NFE2L2Q16236 605 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 NBPF6Q5VWK0 638 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 RPTNQ6XPR3 784 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 BORCS6Q96GS4 357 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 NBPF4Q96M43 638 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 TEPSINQ96N21 525 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 JMJD8Q96S16 334 aa6.26□□□□□ -1.41
SNAPC3-201ENST00000380799 A0A1W2PQJ5 194 aa6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 NOP2P46087 812 aaKnown RBP6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 SERINC3Q13530 473 aa6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 COL9A2Q14055 689 aaPredicted RBP6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 PLEKHN1Q494U1 663 aaPredicted RBP6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 NOL9Q5SY16 702 aaKnown RBP6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 ANKS3Q6ZW76 656 aa6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 TAB3Q8N5C8 712 aaPredicted RBP6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 FEZF2Q8TBJ5 459 aa6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 CPLX3Q8WVH0 158 aa6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 MRFAP1L1Q96HT8 127 aa6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 STRIP2Q9ULQ0 834 aa6.25□□□□□ -1.41
SNAPC3-201ENST00000380799 CYBBP04839 570 aa6.24□□□□□ -1.41
SNAPC3-201ENST00000380799 GSTM1P09488 218 aa6.24□□□□□ -1.41
SNAPC3-201ENST00000380799 PMS1P54277 932 aaKnown RBP6.24□□□□□ -1.41
SNAPC3-201ENST00000380799 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
SNAPC3-201ENST00000380799 RTP2Q5QGT7 225 aa6.24□□□□□ -1.41
SNAPC3-201ENST00000380799 PAQR3Q6TCH7 311 aa6.24□□□□□ -1.41
SNAPC3-201ENST00000380799 FRMD5Q7Z6J6 570 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms