RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 NXNQ6DKJ4 435 aa20.81■□□□□ 0.92
TBC1D4-201ENST00000377625 H2AFVQ71UI9 128 aa20.81■□□□□ 0.92
TBC1D4-201ENST00000377625 NME8Q8N427 588 aa20.81■□□□□ 0.92
TBC1D4-201ENST00000377625 RRAGDQ9NQL2 400 aaPredicted RBP20.81■□□□□ 0.92
TBC1D4-201ENST00000377625 PALD1Q9ULE6 856 aa20.81■□□□□ 0.92
TBC1D4-201ENST00000377625 FAM160B1Q5W0V3 765 aa20.81■□□□□ 0.92
TBC1D4-201ENST00000377625 SPATA1Q5VX52 437 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 SULF1Q8IWU6 871 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 RNF10Q8N5U6 811 aaKnown RBP20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 RABGAP1Q9Y3P9 1069 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 ZNF804BA4D1E1 1349 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 CCDC38Q502W7 563 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 MUM1L1Q5H9M0 696 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 GREM2Q9H772 168 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 GABPB1Q06547 395 aaPredicted RBP20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 AOC3Q16853 763 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 SMAP1Q8IYB5 467 aaPredicted RBP20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 GJA10Q969M2 543 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 ATP10AO60312 1499 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 PIK3CAP42336 1068 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 POMGNT1Q8WZA1 660 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 KLHL14Q9P2G3 628 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 MAP3K15Q6ZN16 1313 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 WDR46O15213 610 aaKnown RBP20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 THAP12O43422 761 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 FOSP01100 380 aaPredicted RBP20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 DIXDC1Q155Q3 683 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 USPL1Q5W0Q7 1092 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 CNKSR1Q969H4 720 aa20.8■□□□□ 0.92
TBC1D4-201ENST00000377625 NSFP46459 744 aaKnown RBP20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 BFSP1Q12934 665 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 ARHGAP27Q6ZUM4 889 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 SCYL1Q96KG9 808 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 STK38LQ9Y2H1 464 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 RNF8O76064 485 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 PDIA3P30101 505 aaKnown RBP20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 NDUFA8P51970 172 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 UBE3CQ15386 1083 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 HAUS4Q9H6D7 363 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 CLIC4Q9Y696 253 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 PCP11498 1178 aaKnown RBP20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 TCP1P17987 556 aaKnown RBP20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 PHKA1P46020 1223 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 RBBP5Q15291 538 aaKnown RBP20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 TAB3Q8N5C8 712 aaPredicted RBP20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 TYW1Q9NV66 732 aaKnown RBP20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 ARHGAP42A6NI28 874 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 ODR4Q5SWX8 454 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 KIAA1024Q9UPX6 916 aa20.79■□□□□ 0.92
TBC1D4-201ENST00000377625 RBM6P78332 1123 aaKnown RBP20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 KAZNQ674X7 775 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 ERBB4Q15303 1308 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 SYNJ2BP-COX16A0A087WUM0 186 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 PSDA5PKW4 1024 aaPredicted RBP20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 ATF2P15336 505 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 FAM71BQ8TC56 605 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 COX16Q9P0S2 106 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 PDE8BO95263 885 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 EP400NLQ6ZTU2 488 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 BAIAP2L1Q9UHR4 511 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 GSTA1P08263 222 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 GSTA2P09210 222 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 EXOC3L4Q17RC7 722 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 AMNQ9BXJ7 453 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 CCDC68Q9H2F9 335 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 GNGT1P63211 74 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 C4orf50Q6ZRC1 276 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 GBP7Q8N8V2 638 aaPredicted RBP20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 ZNF148Q9UQR1 794 aa20.78■□□□□ 0.92
TBC1D4-201ENST00000377625 PTPRTO14522 1441 aa20.77■□□□□ 0.92
TBC1D4-201ENST00000377625 PFDN6O15212 129 aa20.77■□□□□ 0.92
TBC1D4-201ENST00000377625 TSC1Q92574 1164 aa20.77■□□□□ 0.92
TBC1D4-201ENST00000377625 FAM114A2Q9NRY5 505 aa20.77■□□□□ 0.92
TBC1D4-201ENST00000377625 DISC1Q9NRI5 854 aa20.77■□□□□ 0.92
TBC1D4-201ENST00000377625 GOLGA8KD6RF30 607 aa20.77■□□□□ 0.92
TBC1D4-201ENST00000377625 SAT1P21673 171 aa20.77■□□□□ 0.92
TBC1D4-201ENST00000377625 MYL7Q01449 175 aa20.77■□□□□ 0.92
TBC1D4-201ENST00000377625 TFDP1Q14186 410 aa20.77■□□□□ 0.92
TBC1D4-201ENST00000377625 RINT1Q6NUQ1 792 aa20.77■□□□□ 0.92
TBC1D4-201ENST00000377625 LRCH2Q5VUJ6 765 aa20.77■□□□□ 0.91
TBC1D4-201ENST00000377625 SEMA3EO15041 775 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 TLR3O15455 904 aaKnown RBP20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 PTK2Q05397 1052 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 SCRN1Q12765 414 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 MAP3K21Q5TCX8 1036 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 WDR62O43379 1518 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 TRIM37O94972 964 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 RFC1P35251 1148 aaPredicted RBP20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 UHMK1Q8TAS1 419 aaKnown RBP20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 PZPP20742 1482 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 HNRNPDLO14979 420 aaKnown RBP20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 APOL6Q9BWW8 343 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 RTEL1Q9NZ71 1219 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 SEPT9Q9UHD8 586 aaPredicted RBP20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 A6NJR5 290 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 ADORA1P30542 326 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 KCTD2Q14681 263 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 SPICE1Q8N0Z3 855 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 EFCC1Q9HA90 598 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms