RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 PDE4DQ08499 809 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 VPS72Q15906 364 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 MFSD14BQ5SR56 506 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 WDR59Q6PJI9 974 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 CSGALNACT2Q8N6G5 542 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 TBCKQ8TEA7 893 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 CCSER1Q9C0I3 900 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 ARFGAP3Q9NP61 516 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 HDAC6Q9UBN7 1215 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 PSMA7O14818 248 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 PICALMQ13492 652 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 ANKRD40Q6AI12 368 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 LRRC47Q8N1G4 583 aaKnown RBP17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 ZNF507Q8TCN5 953 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 UIMC1Q96RL1 719 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 TRIM9Q9C026 710 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 TCP11L1Q9NUJ3 509 aa17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 EPN1Q9Y6I3 576 aaPredicted RBP17.47■□□□□ 0.39
TMEM50A-201ENST00000374358 F8W031 263 aaPredicted RBP17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 NONOQ15233 471 aaKnown RBP eCLIP17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 C16orf86Q6ZW13 317 aa17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 RPGRQ92834 1020 aaKnown RBP17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 COA7Q96BR5 231 aa17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 MMTAG2Q9BU76 263 aaKnown RBP17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 FUT8Q9BYC5 575 aa17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 LRRC4BQ9NT99 713 aa17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 OAS2P29728 719 aaKnown RBP17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 TXKP42681 527 aa17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 RHBDL3P58872 404 aa17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 KCNB1Q14721 858 aa17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 LONRF2Q1L5Z9 754 aa17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 NOA1Q8NC60 698 aaKnown RBP17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 GJA10Q969M2 543 aa17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 NAPGQ99747 312 aaPredicted RBP17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 LUC7L2Q9Y383 392 aaKnown RBP17.46■□□□□ 0.39
TMEM50A-201ENST00000374358 RASSF10A6NK89 507 aa17.45■□□□□ 0.38
TMEM50A-201ENST00000374358 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
TMEM50A-201ENST00000374358 TUBGCP2Q9BSJ2 902 aa17.45■□□□□ 0.38
TMEM50A-201ENST00000374358 SPZ1Q9BXG8 430 aa17.45■□□□□ 0.38
TMEM50A-201ENST00000374358 LTBP4Q8N2S1 1624 aa17.45■□□□□ 0.38
TMEM50A-201ENST00000374358 HERVK_113P62684 666 aa17.45■□□□□ 0.38
TMEM50A-201ENST00000374358 NEK8Q86SG6 692 aa17.45■□□□□ 0.38
TMEM50A-201ENST00000374358 OR8K1Q8NGG5 319 aa17.45■□□□□ 0.38
TMEM50A-201ENST00000374358 SLC39A2Q9NP94 309 aa17.45■□□□□ 0.38
TMEM50A-201ENST00000374358 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
TMEM50A-201ENST00000374358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 RGL2O15211 777 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 STIM1Q13586 685 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 TRIM14Q14142 442 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 KIAA0895Q8NCT3 520 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 NEDD1Q8NHV4 660 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 RRP36Q96EU6 259 aaKnown RBP17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 CNOT6LQ96LI5 555 aaKnown RBP17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 EXOC1Q9NV70 894 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 MAGEC2Q9UBF1 373 aaPredicted RBP17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 SEC63Q9UGP8 760 aaKnown RBP17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 GPR75-ASB3A0A0A6YYF3 556 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 RCCD1A6NED2 376 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 POTEMA6NI47 508 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 SLC37A4O43826 429 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 SRGAP2O75044 1071 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 TDP2O95551 362 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 LDHCP07864 332 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 TRIM21P19474 475 aaKnown RBP17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 EEF1GP26641 437 aaKnown RBP17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 ST5P78524 1137 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 SMC1AQ14683 1233 aaKnown RBP17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 GALNT17Q6IS24 598 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 DYMQ7RTS9 669 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 REXO1Q8N1G1 1221 aaKnown RBP17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 P2RX5Q93086 422 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 PCMTD1Q96MG8 357 aaPredicted RBP17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 DNAJC7Q99615 494 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 THAP9Q9H5L6 903 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 C6orf50Q9HD87 102 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 DUSP10Q9Y6W6 482 aa17.44■□□□□ 0.38
TMEM50A-201ENST00000374358 H3BQF6 201 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 PRPHP41219 470 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 MCM6Q14566 821 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 KRT25Q7Z3Z0 450 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 CEP112Q8N8E3 955 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 VSNL1P62760 191 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 CYP27A1Q02318 531 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 GLIS3Q8NEA6 775 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 NUDT12Q9BQG2 462 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 MXD3Q9BW11 206 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 LACRTQ9GZZ8 138 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 GPCPD1Q9NPB8 672 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 GGA1Q9UJY5 639 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 CAPN11Q9UMQ6 739 aa17.43■□□□□ 0.38
TMEM50A-201ENST00000374358 LAD1O00515 517 aa17.42■□□□□ 0.38
TMEM50A-201ENST00000374358 RIMBP2O15034 1052 aa17.42■□□□□ 0.38
TMEM50A-201ENST00000374358 EDIL3O43854 480 aa17.42■□□□□ 0.38
TMEM50A-201ENST00000374358 ATP1A1P05023 1023 aaKnown RBP17.42■□□□□ 0.38
TMEM50A-201ENST00000374358 PLEKP08567 350 aaPredicted RBP17.42■□□□□ 0.38
TMEM50A-201ENST00000374358 PDHBP11177 359 aa17.42■□□□□ 0.38
TMEM50A-201ENST00000374358 MTIF2P46199 727 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms