RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 PNOCQ13519 176 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 KCNJ12Q14500 433 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 STAMQ92783 540 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 PRKAG2Q9UGJ0 569 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 JAK2O60674 1132 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 PRPSAP1Q14558 356 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 GBP5Q96PP8 586 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 MAPKBP1O60336 1514 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 KDM5AP29375 1690 aaKnown RBP10.83□□□□□ -0.68
TRERF1-204ENST00000372922 DNMT1P26358 1616 aaKnown RBP10.83□□□□□ -0.68
TRERF1-204ENST00000372922 NDUFAB1O14561 156 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 PIK3CAP42336 1068 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 IGBP1P78318 339 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 MORC3Q14149 939 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 ADALQ6DHV7 355 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 RINT1Q6NUQ1 792 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 ARMC9Q7Z3E5 817 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 CTAGE3PQ8IX95 158 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 RETREG2Q8NC44 543 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 NCAPGQ9BPX3 1015 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 CCDC68Q9H2F9 335 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 TRIM37O94972 964 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 ZRANB2O95218 330 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRERF1-204ENST00000372922 RILPQ96NA2 401 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 THRAP3Q9Y2W1 955 aaKnown RBP10.83□□□□□ -0.68
TRERF1-204ENST00000372922 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
TRERF1-204ENST00000372922 LONRF3Q496Y0 759 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 FAM196AQ6ZSG2 479 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 ADD3Q9UEY8 706 aaKnown RBP10.83□□□□□ -0.68
TRERF1-204ENST00000372922 LRFN2Q9ULH4 789 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 TMEM2Q9UHN6 1383 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 ESYT2A0FGR8 921 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 WDR46O15213 610 aaKnown RBP10.83□□□□□ -0.68
TRERF1-204ENST00000372922 SH2D4BQ5SQS7 431 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 TTLL7Q6ZT98 887 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 METTL23Q86XA0 190 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 TNKSO95271 1327 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 LOC102724428A0A0B4J2F2 783 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 SIK1P57059 783 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 USPL1Q5W0Q7 1092 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 TRIM58Q8NG06 486 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 RPGRIP1Q96KN7 1286 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 CARD6Q9BX69 1037 aa10.83□□□□□ -0.68
TRERF1-204ENST00000372922 BLMP54132 1417 aaPredicted RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 ATP10DQ9P241 1426 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 KIF21AQ7Z4S6 1674 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 MLH3Q9UHC1 1453 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 HMGB1P1B2RPK0 211 aaPredicted RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 DLATP10515 647 aaKnown RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 FAM173BQ6P4H8 233 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 USP6NLQ92738 828 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 SF3A3Q12874 501 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 ASPRV1Q53RT3 343 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 MYSM1Q5VVJ2 828 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 POMGNT1Q8WZA1 660 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 TRIM56Q9BRZ2 755 aaKnown RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 ANKFY1Q9P2R3 1169 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 ABCB4P21439 1286 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 INPP5BP32019 993 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 GPATCH4Q5T3I0 446 aaKnown RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 ANKRD20A3Q5VUR7 823 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 MIS18BP1Q6P0N0 1132 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 PSMB7Q99436 277 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 HGSO14964 777 aaPredicted RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 SMIM24O75264 130 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 ARMCX6Q7L4S7 300 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 BBS5Q8N3I7 341 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 ATP6V0A1Q93050 837 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 AMNQ9BXJ7 453 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 TPCN1Q9ULQ1 816 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 A6NJR5 290 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 RPSAP08865 295 aaKnown RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 RXRBP28702 533 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 TRMT44Q8IYL2 757 aaKnown RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 OR8K1Q8NGG5 319 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 ANKRD36BP1Q96IX9 119 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 SEPT9Q9UHD8 586 aaPredicted RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 AKT3Q9Y243 479 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 PCDHA1Q9Y5I3 950 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 IFNB1P01574 187 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 ABCD1P33897 745 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 CRKLP46109 303 aaKnown RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 C4orf50Q6ZRC1 276 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 ZFYVE16Q7Z3T8 1539 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 NME8Q8N427 588 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 MAGEF1Q9HAY2 307 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 TYW1Q9NV66 732 aaKnown RBP10.82□□□□□ -0.68
TRERF1-204ENST00000372922 NUB1Q9Y5A7 615 aa10.82□□□□□ -0.68
TRERF1-204ENST00000372922 TROVE2P10155 538 aaKnown RBP eCLIP10.81□□□□□ -0.68
TRERF1-204ENST00000372922 LONP1P36776 959 aaKnown RBP10.81□□□□□ -0.68
TRERF1-204ENST00000372922 BPIFB4P59827 614 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 IRAK4Q9NWZ3 460 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 SSH2Q76I76 1423 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 YEATS2Q9ULM3 1422 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 MYCP01106 439 aaPredicted RBP10.81□□□□□ -0.68
TRERF1-204ENST00000372922 LMNB1P20700 586 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 PHLDB2Q86SQ0 1253 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 CMTR1Q8N1G2 835 aaKnown RBP10.81□□□□□ -0.68
TRERF1-204ENST00000372922 IFT122Q9HBG6 1241 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 SLC24A3Q9HC58 644 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms