RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 TECP42680 631 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 GIMAP8Q8ND71 665 aaPredicted RBP32.54■■■□□ 2.8
SSBP3-204ENST00000371320 WDR24Q96S15 920 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 MXD3Q9BW11 206 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 SWAP70Q9UH65 585 aa32.54■■■□□ 2.8
SSBP3-204ENST00000371320 TRIM49BA6NDI0 452 aa32.53■■■□□ 2.8
SSBP3-204ENST00000371320 TTLL1O95922 423 aa32.53■■■□□ 2.8
SSBP3-204ENST00000371320 SNHG28P0DPA3 235 aa32.53■■■□□ 2.8
SSBP3-204ENST00000371320 PSMA7O14818 248 aa32.52■■■□□ 2.8
SSBP3-204ENST00000371320 SCNN1DP51172 638 aa32.52■■■□□ 2.8
SSBP3-204ENST00000371320 NLGN1Q8N2Q7 840 aa32.52■■■□□ 2.8
SSBP3-204ENST00000371320 COA7Q96BR5 231 aa32.52■■■□□ 2.8
SSBP3-204ENST00000371320 GPCPD1Q9NPB8 672 aa32.52■■■□□ 2.8
SSBP3-204ENST00000371320 ADGRG1Q9Y653 693 aa32.52■■■□□ 2.8
SSBP3-204ENST00000371320 ADCY7P51828 1080 aa32.52■■■□□ 2.8
SSBP3-204ENST00000371320 IRF2BP1Q8IU81 584 aa32.52■■■□□ 2.8
SSBP3-204ENST00000371320 CLEC10AQ8IUN9 316 aa32.52■■■□□ 2.8
SSBP3-204ENST00000371320 CCDC47Q96A33 483 aaKnown RBP32.52■■■□□ 2.8
SSBP3-204ENST00000371320 MRPL44Q9H9J2 332 aaKnown RBP32.52■■■□□ 2.8
SSBP3-204ENST00000371320 TRIM14Q14142 442 aa32.51■■■□□ 2.8
SSBP3-204ENST00000371320 POTEDQ86YR6 584 aa32.51■■■□□ 2.8
SSBP3-204ENST00000371320 MNS1Q8NEH6 495 aa32.51■■■□□ 2.8
SSBP3-204ENST00000371320 G3V3G9 751 aa32.5■■■□□ 2.79
SSBP3-204ENST00000371320 PMS1P54277 932 aaKnown RBP32.5■■■□□ 2.79
SSBP3-204ENST00000371320 DCAF8Q5TAQ9 597 aa32.5■■■□□ 2.79
SSBP3-204ENST00000371320 FBXO38Q6PIJ6 1188 aa32.5■■■□□ 2.79
SSBP3-204ENST00000371320 ALDH1B1P30837 517 aa32.5■■■□□ 2.79
SSBP3-204ENST00000371320 UBXN1Q04323 297 aa32.5■■■□□ 2.79
SSBP3-204ENST00000371320 NUP88Q99567 741 aaPredicted RBP32.5■■■□□ 2.79
SSBP3-204ENST00000371320 TRIM9Q9C026 710 aa32.5■■■□□ 2.79
SSBP3-204ENST00000371320 FECHP22830 423 aa32.49■■■□□ 2.79
SSBP3-204ENST00000371320 CDC42EP5Q6NZY7 148 aa32.49■■■□□ 2.79
SSBP3-204ENST00000371320 TRIM47Q96LD4 638 aa32.49■■■□□ 2.79
SSBP3-204ENST00000371320 THAP9Q9H5L6 903 aa32.49■■■□□ 2.79
SSBP3-204ENST00000371320 MYO3BQ8WXR4 1341 aa32.49■■■□□ 2.79
SSBP3-204ENST00000371320 TXKP42681 527 aa32.49■■■□□ 2.79
SSBP3-204ENST00000371320 CALML4Q96GE6 196 aa32.49■■■□□ 2.79
SSBP3-204ENST00000371320 C7orf25Q9BPX7 421 aa32.49■■■□□ 2.79
SSBP3-204ENST00000371320 TMX4Q9H1E5 349 aaPredicted RBP32.49■■■□□ 2.79
SSBP3-204ENST00000371320 ANKRD31Q8N7Z5 1873 aa32.48■■■□□ 2.79
SSBP3-204ENST00000371320 EEF1GP26641 437 aaKnown RBP32.48■■■□□ 2.79
SSBP3-204ENST00000371320 SHMT1P34896 483 aa32.48■■■□□ 2.79
SSBP3-204ENST00000371320 AMPD3Q01432 767 aa32.48■■■□□ 2.79
SSBP3-204ENST00000371320 ZNF543Q08ER8 600 aa32.48■■■□□ 2.79
SSBP3-204ENST00000371320 HHIPL2Q6UWX4 724 aa32.48■■■□□ 2.79
SSBP3-204ENST00000371320 TEKT1Q969V4 418 aa32.48■■■□□ 2.79
SSBP3-204ENST00000371320 DHTKD1Q96HY7 919 aaPredicted RBP32.48■■■□□ 2.79
SSBP3-204ENST00000371320 MMTAG2Q9BU76 263 aaKnown RBP32.48■■■□□ 2.79
SSBP3-204ENST00000371320 ABHD10Q9NUJ1 306 aa32.48■■■□□ 2.79
SSBP3-204ENST00000371320 EXOC1Q9NV70 894 aa32.48■■■□□ 2.79
SSBP3-204ENST00000371320 OGFRQ9NZT2 677 aa32.48■■■□□ 2.79
SSBP3-204ENST00000371320 CALCRLQ16602 461 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 TMTC1Q8IUR5 882 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 KIFC2Q96AC6 838 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 CARD6Q9BX69 1037 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 LZTFL1Q9NQ48 299 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 HLA-DOAP06340 250 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 ASIC1P78348 528 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 PDE4DQ08499 809 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 UBXN4Q92575 508 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 MTMR9Q96QG7 549 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 BRWD3Q6RI45 1802 aa32.47■■■□□ 2.79
SSBP3-204ENST00000371320 PNMA6FA0A0J9YX94 578 aa32.46■■■□□ 2.79
SSBP3-204ENST00000371320 PDE6BP35913 854 aa32.46■■■□□ 2.79
SSBP3-204ENST00000371320 MAP3K9P80192 1104 aa32.46■■■□□ 2.79
SSBP3-204ENST00000371320 TTI2Q6NXR4 508 aa32.46■■■□□ 2.79
SSBP3-204ENST00000371320 COL23A1Q86Y22 540 aaPredicted RBP32.46■■■□□ 2.79
SSBP3-204ENST00000371320 ADGRF4Q8IZF3 695 aa32.46■■■□□ 2.79
SSBP3-204ENST00000371320 NOC3LQ8WTT2 800 aaKnown RBP32.46■■■□□ 2.79
SSBP3-204ENST00000371320 JMJD4Q9H9V9 463 aa32.46■■■□□ 2.79
SSBP3-204ENST00000371320 MAGEC2Q9UBF1 373 aaPredicted RBP32.46■■■□□ 2.79
SSBP3-204ENST00000371320 DDX41Q9UJV9 622 aaKnown RBP32.46■■■□□ 2.79
SSBP3-204ENST00000371320 QSER1Q2KHR3 1735 aa32.46■■■□□ 2.79
SSBP3-204ENST00000371320 APOBEC3HQ6NTF7 200 aaKnown RBP32.46■■■□□ 2.79
SSBP3-204ENST00000371320 LGALS16A8MUM7 142 aa32.45■■■□□ 2.79
SSBP3-204ENST00000371320 RNF225M0QZC1 329 aaPredicted RBP32.45■■■□□ 2.79
SSBP3-204ENST00000371320 MPHOSPH10O00566 681 aaKnown RBP32.45■■■□□ 2.79
SSBP3-204ENST00000371320 GTPBP4Q9BZE4 634 aaKnown RBP32.45■■■□□ 2.79
SSBP3-204ENST00000371320 LRWD1Q9UFC0 647 aa32.45■■■□□ 2.79
SSBP3-204ENST00000371320 ARHGAP29Q52LW3 1261 aa32.44■■■□□ 2.78
SSBP3-204ENST00000371320 PPP1R18Q6NYC8 613 aa32.44■■■□□ 2.78
SSBP3-204ENST00000371320 MB21D1Q8N884 522 aa32.44■■■□□ 2.78
SSBP3-204ENST00000371320 TADA3O75528 432 aa32.44■■■□□ 2.78
SSBP3-204ENST00000371320 ATP2B2Q01814 1243 aa32.44■■■□□ 2.78
SSBP3-204ENST00000371320 TMEM266Q2M3C6 531 aa32.44■■■□□ 2.78
SSBP3-204ENST00000371320 CYP26C1Q6V0L0 522 aa32.44■■■□□ 2.78
SSBP3-204ENST00000371320 RIC8AQ9NPQ8 531 aa32.44■■■□□ 2.78
SSBP3-204ENST00000371320 EFCAB8A8MWE9 144 aa32.43■■■□□ 2.78
SSBP3-204ENST00000371320 PES1O00541 588 aaKnown RBP32.43■■■□□ 2.78
SSBP3-204ENST00000371320 KRT9P35527 623 aa32.43■■■□□ 2.78
SSBP3-204ENST00000371320 FXR2P51116 673 aaKnown RBP eCLIP32.43■■■□□ 2.788e-6■■■■□ 21.8
SSBP3-204ENST00000371320 CSGALNACT2Q8N6G5 542 aa32.43■■■□□ 2.78
SSBP3-204ENST00000371320 BICDL2A1A5D9 508 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 SLC37A4O43826 429 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 TDP2O95551 362 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 H2AFXP16104 143 aaPredicted RBP32.42■■■□□ 2.78
SSBP3-204ENST00000371320 ERVK-24P63145 666 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 CCDC96Q2M329 555 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 GPATCH4Q5T3I0 446 aaKnown RBP32.42■■■□□ 2.78
SSBP3-204ENST00000371320 TTBK2Q6IQ55 1244 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms