RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 MYH8P13535 1937 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 LOC102724428A0A0B4J2F2 783 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 MYBL2P10244 700 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 ATP1A2P50993 1020 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 NAPAP54920 295 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 SIK1P57059 783 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 SEC23AQ15436 765 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 CYP26C1Q6V0L0 522 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 RSRC2Q7L4I2 434 aaKnown RBP9.93□□□□□ -0.82
THBS3-201ENST00000368378 HDXQ7Z353 690 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 NELFCDQ8IXH7 590 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 HDAC7Q8WUI4 952 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 IFT81Q8WYA0 676 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.93□□□□□ -0.82
THBS3-201ENST00000368378 PHF20Q9BVI0 1012 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 NOC4LQ9BVI4 516 aaKnown RBP9.93□□□□□ -0.82
THBS3-201ENST00000368378 GOLPH3Q9H4A6 298 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 LRWD1Q9UFC0 647 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 TAF1P21675 1872 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 PNPLA7Q6ZV29 1317 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 AKR1B10O60218 316 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 TUBB4AP04350 444 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 GRIK5Q16478 980 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 BEND6Q5SZJ8 279 aaPredicted RBP9.93□□□□□ -0.82
THBS3-201ENST00000368378 INTS5Q6P9B9 1019 aaKnown RBP9.93□□□□□ -0.82
THBS3-201ENST00000368378 APTXQ7Z2E3 356 aaKnown RBP9.93□□□□□ -0.82
THBS3-201ENST00000368378 CEP112Q8N8E3 955 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 ZNF384Q8TF68 577 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 JAKMIP2Q96AA8 810 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 SGSM3Q96HU1 749 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 TMEM260Q9NX78 707 aa9.93□□□□□ -0.82
THBS3-201ENST00000368378 RTL9Q8NET4 1388 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 SLIT2O94813 1529 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 ZEB2O60315 1214 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 MOCS3O95396 460 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 STK4Q13043 487 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 SF3B2Q13435 895 aaKnown RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 TMTC3Q6ZXV5 915 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 TXLNBQ8N3L3 684 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 GLIS3Q8NEA6 775 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 FAM84BQ96KN1 310 aaPredicted RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 CTAGE1Q96RT6 745 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 ZNHIT6Q9NWK9 470 aaKnown RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 SAMM50Q9Y512 469 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 MYO1CO00159 1063 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 RNF40O75150 1001 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 PLCG1P19174 1290 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 ERCC5P28715 1186 aaPredicted RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 NT5DC1Q5TFE4 455 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 FCHSD1Q86WN1 690 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 NBPF5PQ86XG9 351 aaPredicted RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 BLIDQ8IZY5 108 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 ZNF444Q8N0Y2 327 aaPredicted RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 TRIML1Q8N9V2 468 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 ZNF579Q8NAF0 562 aaKnown RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 SMARCC1Q92922 1105 aaPredicted RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 COA7Q96BR5 231 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 RRP36Q96EU6 259 aaKnown RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 GSDMAQ96QA5 445 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 TUBGCP2Q9BSJ2 902 aa9.92□□□□□ -0.82
THBS3-201ENST00000368378 DCP1AQ9NPI6 582 aaPredicted RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.92□□□□□ -0.82
THBS3-201ENST00000368378 CCDC151A5D8V7 595 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 POTEMA6NI47 508 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 EIF3JO75822 258 aaKnown RBP9.91□□□□□ -0.82
THBS3-201ENST00000368378 TXNRD1Q16881 649 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 CCDC181Q5TID7 509 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 SPTY2D1Q68D10 685 aaPredicted RBP9.91□□□□□ -0.82
THBS3-201ENST00000368378 SND1Q7KZF4 910 aaKnown RBP eCLIP9.91□□□□□ -0.82
THBS3-201ENST00000368378 MS4A14Q96JA4 679 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 CDK5RAP3Q96JB5 506 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 CCDC42Q96M95 316 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 GPCPD1Q9NPB8 672 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 BCS1LQ9Y276 419 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 SAR1BQ9Y6B6 198 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 ZSCAN5CA6NGD5 496 aaPredicted RBP9.91□□□□□ -0.82
THBS3-201ENST00000368378 CAMTA2O94983 1202 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 TNNI2P48788 182 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 GUCY2FP51841 1108 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 SLC20A2Q08357 652 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 LLGL1Q15334 1064 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 NFRKBQ6P4R8 1299 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 RRAGAQ7L523 313 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 TMTC1Q8IUR5 882 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 LRRC47Q8N1G4 583 aaKnown RBP9.91□□□□□ -0.82
THBS3-201ENST00000368378 OR8K1Q8NGG5 319 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 PANX2Q96RD6 677 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 RIOK1Q9BRS2 568 aaKnown RBP9.91□□□□□ -0.82
THBS3-201ENST00000368378 EXOC1Q9NV70 894 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 MINPP1Q9UNW1 487 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 REXO2Q9Y3B8 237 aaKnown RBP9.91□□□□□ -0.82
THBS3-201ENST00000368378 PSMA7O14818 248 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 NTSR2O95665 410 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 GGCXP38435 758 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 KCTD17Q8N5Z5 321 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 SH3RF3Q8TEJ3 882 aaPredicted RBP9.91□□□□□ -0.82
THBS3-201ENST00000368378 LRRC15Q8TF66 581 aa9.91□□□□□ -0.82
THBS3-201ENST00000368378 CRNKL1Q9BZJ0 848 aaKnown RBP9.91□□□□□ -0.82
THBS3-201ENST00000368378 ZNF219Q9P2Y4 722 aaPredicted RBP9.91□□□□□ -0.82
THBS3-201ENST00000368378 PPP1R1BQ9UD71 204 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms