RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PRDM15P57071 1507 aaPredicted RBP9.56□□□□□ -0.88
COL6A6-201ENST00000358511 IFNB1P01574 187 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 ATXN8OSP0DMR3 200 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 TBC1D1Q86TI0 1168 aaPredicted RBP9.56□□□□□ -0.88
COL6A6-201ENST00000358511 REXO1Q8N1G1 1221 aaKnown RBP9.56□□□□□ -0.88
COL6A6-201ENST00000358511 LRGUKQ96M69 825 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 HINFPQ9BQA5 517 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 KCNJ14Q9UNX9 436 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 KRT80Q6KB66 452 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 OSBPL1AQ9BXW6 950 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 ORC6Q9Y5N6 252 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 MED23Q9ULK4 1368 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 MYOM2P54296 1465 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 VPS41P49754 854 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 SLC39A14Q15043 492 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 RSPH3Q86UC2 560 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 OSBPL5Q9H0X9 879 aaPredicted RBP9.56□□□□□ -0.88
COL6A6-201ENST00000358511 TBC1D7Q9P0N9 293 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 PLAAQ9Y263 795 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 CLIC4Q9Y696 253 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 ADGRL2O95490 1459 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 CXCR5P32302 372 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 MUM1L1Q5H9M0 696 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 BEND6Q5SZJ8 279 aaPredicted RBP9.56□□□□□ -0.88
COL6A6-201ENST00000358511 LSG1Q9H089 658 aaKnown RBP9.56□□□□□ -0.88
COL6A6-201ENST00000358511 NFU1Q9UMS0 254 aa9.56□□□□□ -0.88
COL6A6-201ENST00000358511 B4DLN1 442 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 RPS6KA2Q15349 733 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 NXNQ6DKJ4 435 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 CNOT6LQ96LI5 555 aaKnown RBP9.55□□□□□ -0.88
COL6A6-201ENST00000358511 SPHKAPQ2M3C7 1700 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 STXBP3O00186 592 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 RASGRF2O14827 1237 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 HNRNPCP07910 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
COL6A6-201ENST00000358511 ELF1P32519 619 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 MTHFSDQ2M296 383 aaKnown RBP9.55□□□□□ -0.88
COL6A6-201ENST00000358511 MMEL1Q495T6 779 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 MYOCDQ8IZQ8 938 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 LRWD1Q9UFC0 647 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 ARMCX3Q9UH62 379 aaPredicted RBP9.55□□□□□ -0.88
COL6A6-201ENST00000358511 INTUQ9ULD6 942 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 GMNCA6NCL1 334 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 RWDD2BP57060 319 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 GOLGA8FQ08AF8 430 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 GOLGA8DPQ0D2H9 430 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 AKNAD1Q5T1N1 836 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 TOGARAM2Q6ZUX3 1019 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 SYMPKQ92797 1274 aaKnown RBP9.55□□□□□ -0.88
COL6A6-201ENST00000358511 OSBPL3Q9H4L5 887 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 VPS54Q9P1Q0 977 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 TRIM66O15016 1216 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 EEF1DP29692 281 aaKnown RBP9.55□□□□□ -0.88
COL6A6-201ENST00000358511 CDR2Q01850 454 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 DYDC2Q96IM9 177 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 RWDD2AQ9UIY3 292 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 DNM3Q9UQ16 869 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 A0A0D9SFI3 127 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 SPAG7O75391 227 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 ZNF804AQ7Z570 1209 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 NHEJ1Q9H9Q4 299 aaPredicted RBP9.55□□□□□ -0.88
COL6A6-201ENST00000358511 ABCC12Q96J65 1359 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 N4BP1O75113 896 aaKnown RBP9.55□□□□□ -0.88
COL6A6-201ENST00000358511 ATP5JP18859 108 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 SLC7A5Q01650 507 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 PTH1RQ03431 593 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 GPIHBP1Q8IV16 184 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 ANKRD65E5RJM6 399 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 HSPA6P17066 643 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 MSH2P43246 934 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 STAMQ92783 540 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 LRRC37BQ96QE4 947 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
COL6A6-201ENST00000358511 NUP153P49790 1475 aaKnown RBP9.55□□□□□ -0.88
COL6A6-201ENST00000358511 MYL1P05976 194 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 ADAT2Q7Z6V5 191 aaKnown RBP9.54□□□□□ -0.88
COL6A6-201ENST00000358511 USP6NLQ92738 828 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 SERPINI1Q99574 410 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 CUEDC2Q9H467 287 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 CTIFO43310 598 aaKnown RBP9.54□□□□□ -0.88
COL6A6-201ENST00000358511 TRPA1O75762 1119 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 INHBAP08476 426 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 KCNA4P22459 653 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 TXKP42681 527 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 ACTN3Q08043 901 aaPredicted RBP9.54□□□□□ -0.88
COL6A6-201ENST00000358511 PUM3Q15397 648 aaKnown RBP9.54□□□□□ -0.88
COL6A6-201ENST00000358511 CABP7Q86V35 215 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 GDAP1Q8TB36 358 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 PCDHA5Q9Y5H7 936 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 TTC4O95801 387 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 PLS1Q14651 629 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 TMEM60Q9H2L4 133 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 VIPAS39Q9H9C1 493 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 SLC12A2P55011 1212 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 TEX9Q8N6V9 391 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 DHTKD1Q96HY7 919 aaPredicted RBP9.54□□□□□ -0.88
COL6A6-201ENST00000358511 ARHGAP10A1A4S6 786 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 EXOC3O60645 756 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 ATF7P17544 494 aaPredicted RBP9.54□□□□□ -0.88
COL6A6-201ENST00000358511 PSMD7P51665 324 aa9.54□□□□□ -0.88
COL6A6-201ENST00000358511 TRMT2AQ8IZ69 625 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms