RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ODR4Q5SWX8 454 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 SYMPKQ92797 1274 aaKnown RBP19.76■□□□□ 0.75
COL18A1-202ENST00000355480 TLR3O15455 904 aaKnown RBP19.76■□□□□ 0.75
COL18A1-202ENST00000355480 POLR2BP30876 1174 aaKnown RBP19.76■□□□□ 0.75
COL18A1-202ENST00000355480 GBP1P32455 592 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 PPFIA1Q13136 1202 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 RPS6KA2Q15349 733 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 RTEL1Q9NZ71 1219 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 MLH3Q9UHC1 1453 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 PHBP35232 272 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 LONP1P36776 959 aaKnown RBP19.76■□□□□ 0.75
COL18A1-202ENST00000355480 GUCY2FP51841 1108 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 NAA25Q14CX7 972 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 LRCH2Q5VUJ6 765 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 C4orf50Q6ZRC1 276 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 KIAA1024Q9UPX6 916 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 SERPINB2P05120 415 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 FAM196AQ6ZSG2 479 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 GDAP1L1Q96MZ0 367 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 NUB1Q9Y5A7 615 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 RGS16O15492 202 aaPredicted RBP19.75■□□□□ 0.75
COL18A1-202ENST00000355480 IL6STP40189 918 aaPredicted RBP19.75■□□□□ 0.75
COL18A1-202ENST00000355480 AOC3Q16853 763 aa19.75■□□□□ 0.75
COL18A1-202ENST00000355480 GPATCH4Q5T3I0 446 aaKnown RBP19.75■□□□□ 0.75
COL18A1-202ENST00000355480 ZBTB1Q9Y2K1 713 aa19.75■□□□□ 0.75
COL18A1-202ENST00000355480 DNMT1P26358 1616 aaKnown RBP19.75■□□□□ 0.75
COL18A1-202ENST00000355480 TRIML1Q8N9V2 468 aa19.75■□□□□ 0.75
COL18A1-202ENST00000355480 DESI2Q9BSY9 194 aa19.75■□□□□ 0.75
COL18A1-202ENST00000355480 DBNDD1Q9H9R9 158 aa19.75■□□□□ 0.75
COL18A1-202ENST00000355480 HYOU1Q9Y4L1 999 aa19.75■□□□□ 0.75
COL18A1-202ENST00000355480 HNRNPDLO14979 420 aaKnown RBP19.75■□□□□ 0.75
COL18A1-202ENST00000355480 STX2P32856 288 aa19.75■□□□□ 0.75
COL18A1-202ENST00000355480 ABI1Q8IZP0 508 aa19.75■□□□□ 0.75
COL18A1-202ENST00000355480 DISC1Q9NRI5 854 aa19.75■□□□□ 0.75
COL18A1-202ENST00000355480 PALD1Q9ULE6 856 aa19.75■□□□□ 0.75
COL18A1-202ENST00000355480 PDIA3P30101 505 aaKnown RBP19.74■□□□□ 0.75
COL18A1-202ENST00000355480 CTNNA1P35221 906 aaKnown RBP19.74■□□□□ 0.75
COL18A1-202ENST00000355480 ASPRV1Q53RT3 343 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 AKT3Q9Y243 479 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 OSBPP22059 807 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 INPP5BP32019 993 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 RPGRIP1Q96KN7 1286 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 RNF8O76064 485 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 CIAO1O76071 339 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 MUM1L1Q5H9M0 696 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 KCTD1Q719H9 257 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 ZNF577Q9BSK1 485 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 TTLL1O95922 423 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 NSFP46459 744 aaKnown RBP19.74■□□□□ 0.75
COL18A1-202ENST00000355480 USP14P54578 494 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 ATP6V0A1Q93050 837 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 COPRSQ9NQ92 184 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 CASQ2O14958 399 aaPredicted RBP19.74■□□□□ 0.75
COL18A1-202ENST00000355480 VCXQ9H320 206 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 PCDHA7Q9UN72 937 aa19.74■□□□□ 0.75
COL18A1-202ENST00000355480 CAPN12Q6ZSI9 719 aa19.73■□□□□ 0.75
COL18A1-202ENST00000355480 PPP4R1Q8TF05 950 aa19.73■□□□□ 0.75
COL18A1-202ENST00000355480 TMEM63CQ9P1W3 806 aa19.73■□□□□ 0.75
COL18A1-202ENST00000355480 TMEM94Q12767 1356 aa19.73■□□□□ 0.75
COL18A1-202ENST00000355480 PPP2R5AQ15172 486 aa19.73■□□□□ 0.75
COL18A1-202ENST00000355480 PROSER3Q2NL68 480 aa19.73■□□□□ 0.75
COL18A1-202ENST00000355480 ADAT2Q7Z6V5 191 aaKnown RBP19.73■□□□□ 0.75
COL18A1-202ENST00000355480 TAB3Q8N5C8 712 aaPredicted RBP19.73■□□□□ 0.75
COL18A1-202ENST00000355480 AP5M1Q9H0R1 490 aa19.73■□□□□ 0.75
COL18A1-202ENST00000355480 GDF11O95390 407 aa19.73■□□□□ 0.75
COL18A1-202ENST00000355480 CLIC4Q9Y696 253 aa19.73■□□□□ 0.75
COL18A1-202ENST00000355480 MYOM2P54296 1465 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 XPOTO43592 962 aaKnown RBP19.72■□□□□ 0.75
COL18A1-202ENST00000355480 RSPH3Q86UC2 560 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 CCDC68Q9H2F9 335 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 MTMR6Q9Y217 621 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 H2AFZP0C0S5 128 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 MYL7Q01449 175 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 ARHGEF6Q15052 776 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 ERFEQ4G0M1 354 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 KAZNQ674X7 775 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 H2AFVQ71UI9 128 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 PNMA8AQ86V59 439 aaPredicted RBP19.72■□□□□ 0.75
COL18A1-202ENST00000355480 PPP1R12CQ9BZL4 782 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 PFDN6O15212 129 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 RNF40O75150 1001 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 TROVE2P10155 538 aaKnown RBP eCLIP19.72■□□□□ 0.753e-6■■□□□ 12.9
COL18A1-202ENST00000355480 EXOC3L4Q17RC7 722 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 WHAMMP3Q1A5X7 153 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 SUPT20HL1Q3ZLR7 823 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 SLC7A3Q8WY07 619 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 SEPT6Q14141 434 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 TMC4Q7Z404 712 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 LMNTD2Q8IXW0 634 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 BFSP1Q12934 665 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 CCDC13Q8IYE1 715 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 FANCLQ9NW38 375 aa19.72■□□□□ 0.75
COL18A1-202ENST00000355480 A6NJR5 290 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 DYNLL1P63167 89 aaKnown RBP19.71■□□□□ 0.75
COL18A1-202ENST00000355480 PTK2Q05397 1052 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 SCRN1Q12765 414 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 PPP2R5EQ16537 467 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 Q3C1V9 767 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 CC2D2BQ6DHV5 1058 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms