RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 PCDHA13Q9Y5I0 950 aa22.82■■□□□ 1.24
CMTM4-201ENST00000330687 SCTRP47872 440 aa22.82■■□□□ 1.24
CMTM4-201ENST00000330687 ZC3H6P61129 1189 aaKnown RBP22.82■■□□□ 1.24
CMTM4-201ENST00000330687 FOXO4P98177 505 aa22.82■■□□□ 1.24
CMTM4-201ENST00000330687 TTC38Q5R3I4 469 aa22.82■■□□□ 1.24
CMTM4-201ENST00000330687 RRAGAQ7L523 313 aa22.82■■□□□ 1.24
CMTM4-201ENST00000330687 FNBP4Q8N3X1 1017 aaPredicted RBP22.82■■□□□ 1.24
CMTM4-201ENST00000330687 MIGA1Q8NAN2 632 aa22.82■■□□□ 1.24
CMTM4-201ENST00000330687 SEC16BQ96JE7 1060 aa22.82■■□□□ 1.24
CMTM4-201ENST00000330687 PP2D1A8MPX8 630 aa22.81■■□□□ 1.24
CMTM4-201ENST00000330687 EXOC1Q9NV70 894 aa22.81■■□□□ 1.24
CMTM4-201ENST00000330687 ANO9A1A5B4 782 aa22.81■■□□□ 1.24
CMTM4-201ENST00000330687 A6NNZ2 444 aa22.81■■□□□ 1.24
CMTM4-201ENST00000330687 ZNF263O14978 683 aa22.81■■□□□ 1.24
CMTM4-201ENST00000330687 KRT2P35908 639 aa22.81■■□□□ 1.24
CMTM4-201ENST00000330687 TUBB8Q3ZCM7 444 aa22.81■■□□□ 1.24
CMTM4-201ENST00000330687 ZNF579Q8NAF0 562 aaKnown RBP22.81■■□□□ 1.24
CMTM4-201ENST00000330687 RAPGEF4Q8WZA2 1011 aa22.81■■□□□ 1.24
CMTM4-201ENST00000330687 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.81■■□□□ 1.24
CMTM4-201ENST00000330687 MON2Q7Z3U7 1717 aa22.81■■□□□ 1.24
CMTM4-201ENST00000330687 EHHADHQ08426 723 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 IFFO1Q0D2I5 559 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 SELENOSQ9BQE4 189 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 NLRC4Q9NPP4 1024 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 TBC1D2BQ9UPU7 963 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 AP1G2O75843 785 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 MBD4O95243 580 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 CFAP221Q4G0U5 840 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 LEMD3Q9Y2U8 911 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 PSMA7O14818 248 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 TATP17735 454 aaPredicted RBP22.8■■□□□ 1.24
CMTM4-201ENST00000330687 TCP1P17987 556 aaKnown RBP22.8■■□□□ 1.24
CMTM4-201ENST00000330687 KCNB1Q14721 858 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 AP1ARQ63HQ0 302 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 TAX1BP1Q86VP1 789 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 CRACR2BQ8N4Y2 399 aaPredicted RBP22.8■■□□□ 1.24
CMTM4-201ENST00000330687 DNAJC7Q99615 494 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 NOD2Q9HC29 1040 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 SPATS2LQ9NUQ6 558 aaKnown RBP22.8■■□□□ 1.24
CMTM4-201ENST00000330687 STK38LQ9Y2H1 464 aa22.8■■□□□ 1.24
CMTM4-201ENST00000330687 MYH10P35580 1976 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 KIF11P52732 1056 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 CACNA2D4Q7Z3S7 1137 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 IRF2BP1Q8IU81 584 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 CNNM1Q9NRU3 951 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 LAMA4Q16363 1823 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 H7C1D1 291 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 GFPT1Q06210 699 aaPredicted RBP22.79■■□□□ 1.24
CMTM4-201ENST00000330687 ANKRD20A8PQ5CZ79 823 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 ESCO1Q5FWF5 840 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 GKAP1Q5VSY0 366 aaPredicted RBP22.79■■□□□ 1.24
CMTM4-201ENST00000330687 PARD3BQ8TEW8 1205 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 FAM89AQ96GI7 184 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 NLRP3Q96P20 1036 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 SNRPA1P09661 255 aaKnown RBP22.79■■□□□ 1.24
CMTM4-201ENST00000330687 SLC8A1P32418 973 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 MCAMP43121 646 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 KRT71Q3SY84 523 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 FBXL16Q8N461 479 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 ARMC2Q8NEN0 867 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 HPS3Q969F9 1004 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 GOLPH3Q9H4A6 298 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 GOPCQ9HD26 462 aa22.79■■□□□ 1.24
CMTM4-201ENST00000330687 DNM2P50570 870 aa22.78■■□□□ 1.24
CMTM4-201ENST00000330687 ZNF658Q5TYW1 1059 aaPredicted RBP22.78■■□□□ 1.24
CMTM4-201ENST00000330687 ARFGAP2Q8N6H7 521 aa22.78■■□□□ 1.24
CMTM4-201ENST00000330687 FANCBQ8NB91 859 aa22.78■■□□□ 1.24
CMTM4-201ENST00000330687 UHMK1Q8TAS1 419 aaKnown RBP22.78■■□□□ 1.24
CMTM4-201ENST00000330687 CASKIN2Q8WXE0 1202 aa22.78■■□□□ 1.24
CMTM4-201ENST00000330687 MTRQ99707 1265 aa22.78■■□□□ 1.24
CMTM4-201ENST00000330687 NKRFO15226 690 aaKnown RBP eCLIP22.78■■□□□ 1.24
CMTM4-201ENST00000330687 ACTR5Q9H9F9 607 aaPredicted RBP22.78■■□□□ 1.24
CMTM4-201ENST00000330687 SNAP23O00161 211 aa22.78■■□□□ 1.24
CMTM4-201ENST00000330687 SLC4A8Q2Y0W8 1093 aa22.78■■□□□ 1.24
CMTM4-201ENST00000330687 TRIM68Q6AZZ1 485 aa22.78■■□□□ 1.24
CMTM4-201ENST00000330687 ZNF654Q8IZM8 581 aa22.78■■□□□ 1.24
CMTM4-201ENST00000330687 PIH1D3Q9NQM4 214 aaKnown RBP22.78■■□□□ 1.24
CMTM4-201ENST00000330687 MAGOHP61326 146 aaKnown RBP22.77■■□□□ 1.24
CMTM4-201ENST00000330687 HLFQ16534 295 aa22.77■■□□□ 1.24
CMTM4-201ENST00000330687 MAGOHBQ96A72 148 aaKnown RBP22.77■■□□□ 1.24
CMTM4-201ENST00000330687 FECHP22830 423 aa22.77■■□□□ 1.24
CMTM4-201ENST00000330687 IFNAR2P48551 515 aa22.77■■□□□ 1.24
CMTM4-201ENST00000330687 NLRP5P59047 1200 aa22.77■■□□□ 1.24
CMTM4-201ENST00000330687 MAP2K1Q02750 393 aaPredicted RBP22.77■■□□□ 1.24
CMTM4-201ENST00000330687 CHADLQ6NUI6 762 aa22.77■■□□□ 1.24
CMTM4-201ENST00000330687 IQCKQ8N0W5 287 aa22.77■■□□□ 1.24
CMTM4-201ENST00000330687 MAGEB6Q8N7X4 407 aa22.77■■□□□ 1.24
CMTM4-201ENST00000330687 CNOT6LQ96LI5 555 aaKnown RBP22.77■■□□□ 1.24
CMTM4-201ENST00000330687 CPSF2Q9P2I0 782 aaKnown RBP22.77■■□□□ 1.24
CMTM4-201ENST00000330687 RGPD1P0DJD0 1748 aa22.77■■□□□ 1.24
CMTM4-201ENST00000330687 OVOS2A0A0G2JMS6 1433 aa22.77■■□□□ 1.23
CMTM4-201ENST00000330687 GTPBP6O43824 516 aaPredicted RBP22.76■■□□□ 1.23
CMTM4-201ENST00000330687 EPB41P11171 864 aaKnown RBP22.76■■□□□ 1.23
CMTM4-201ENST00000330687 LDHAL6AQ6ZMR3 332 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 CCDC50Q8IVM0 306 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 CCDC63Q8NA47 563 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 KCNV2Q8TDN2 545 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 SALL4Q9UJQ4 1053 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 LRRC10BA6NIK2 292 aa22.76■■□□□ 1.23
CMTM4-201ENST00000330687 DCDC2CA8MYV0 355 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms