RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PLVAPQ9BX97 442 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 ZNF408Q9H9D4 720 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 PCDHA4Q9UN74 947 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 DLGAP5Q15398 846 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 LARP4BQ92615 738 aaKnown RBP18.21■□□□□ 0.51
CLIP4-201ENST00000320081 ARHGEF10LQ9HCE6 1279 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 IKBKGQ9Y6K9 419 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 DLATP10515 647 aaKnown RBP18.21■□□□□ 0.51
CLIP4-201ENST00000320081 GUCY2DQ02846 1103 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 KRT71Q3SY84 523 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 TSGA10Q9BZW7 698 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 ASIC3Q9UHC3 531 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 RIPOR2Q9Y4F9 1068 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 POLR1AO95602 1720 aaPredicted RBP18.21■□□□□ 0.51
CLIP4-201ENST00000320081 PPRC1Q5VV67 1664 aaKnown RBP18.21■□□□□ 0.5
CLIP4-201ENST00000320081 KIF4AO95239 1232 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 ADCY1Q08828 1119 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 CFAP221Q4G0U5 840 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 ARMCX5Q6P1M9 558 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
CLIP4-201ENST00000320081 KMT5BQ4FZB7 885 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 TBC1D9BQ66K14 1250 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 DHX40Q8IX18 779 aaKnown RBP18.2■□□□□ 0.5
CLIP4-201ENST00000320081 TBC1D22AQ8WUA7 517 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 SERPINB13Q9UIV8 391 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 CROCC2H7BZ55 1655 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 DESP17661 470 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 NR2F2P24468 414 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 ERCC5P28715 1186 aaPredicted RBP18.2■□□□□ 0.5
CLIP4-201ENST00000320081 ANTXR2P58335 489 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 GSPT2Q8IYD1 628 aaKnown RBP18.2■□□□□ 0.5
CLIP4-201ENST00000320081 PALLDQ8WX93 1383 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 PDE4DIPQ5VU43 2346 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L15C9J2P7 530 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L13C9JLJ4 530 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L11C9JVI0 530 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L18D6R9N7 530 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L22D6RA61 530 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L17D6RBQ6 530 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L19D6RCP7 530 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L20D6RJB6 530 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 RAD17O75943 681 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 LONP1P36776 959 aaKnown RBP18.2■□□□□ 0.5
CLIP4-201ENST00000320081 GABPB1Q06547 395 aaPredicted RBP18.2■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L24Q0WX57 530 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L6PQ6QN14 398 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 CCDC121Q6ZUS5 278 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 HAUS4Q9H6D7 363 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 RASAL2Q9UJF2 1139 aa18.2■□□□□ 0.5
CLIP4-201ENST00000320081 DDIT3P35638 169 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 C2orf54Q08AI8 447 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 RABL6Q3YEC7 729 aaPredicted RBP18.19■□□□□ 0.5
CLIP4-201ENST00000320081 PPM1KQ8N3J5 372 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.19■□□□□ 0.5
CLIP4-201ENST00000320081 DCP1AQ9NPI6 582 aaPredicted RBP18.19■□□□□ 0.5
CLIP4-201ENST00000320081 TMEM260Q9NX78 707 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 FAN1Q9Y2M0 1017 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 IQSEC2Q5JU85 1478 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 EZRP15311 586 aaKnown RBP18.19■□□□□ 0.5
CLIP4-201ENST00000320081 CEP85LQ5SZL2 805 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 PLA2G4DQ86XP0 818 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 CCDC105Q8IYK2 499 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 ADAMTS1Q9UHI8 967 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 MOCS3O95396 460 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 RESP18Q5W5W9 173 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 SRGAP1Q7Z6B7 1085 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 FAM178BQ8IXR5 827 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 BCS1LQ9Y276 419 aa18.19■□□□□ 0.5
CLIP4-201ENST00000320081 FLOT1O75955 427 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 METTL16Q86W50 562 aaKnown RBP18.18■□□□□ 0.5
CLIP4-201ENST00000320081 P2RX5Q93086 422 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 PCIF1Q9H4Z3 704 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 IFNB1P01574 187 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 CD19P15391 556 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 CDK8P49336 464 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 FBXO11Q86XK2 927 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 FAM133AQ8N9E0 248 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 CLEC11AQ9Y240 323 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 NRKQ7Z2Y5 1582 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 AP5Z1O43299 807 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 PPP1R14CQ8TAE6 165 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 WDR24Q96S15 920 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 LZTS2Q9BRK4 669 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 HDAC6Q9UBN7 1215 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 STAT1P42224 750 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 TMTC3Q6ZXV5 915 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 USP37Q86T82 979 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 IFT20Q8IY31 132 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 CSRNP1Q96S65 589 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 RASSF4Q9H2L5 321 aa18.18■□□□□ 0.5
CLIP4-201ENST00000320081 XDHP47989 1333 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 USP17L5A8MUK1 530 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 PRPF3O43395 683 aaKnown RBP18.17■□□□□ 0.5
CLIP4-201ENST00000320081 PRCPP42785 496 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 RFX5P48382 616 aaPredicted RBP18.17■□□□□ 0.5
CLIP4-201ENST00000320081 IQCB1Q15051 598 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 KRT12Q99456 494 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 SCAF8Q9UPN6 1271 aaKnown RBP18.17■□□□□ 0.5
CLIP4-201ENST00000320081 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
CLIP4-201ENST00000320081 TNNI1P19237 187 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms