RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 GABPAQ06546 454 aa11.18□□□□□ -0.62
KARS-202ENST00000319410 GRIK3Q13003 919 aa11.18□□□□□ -0.62
KARS-202ENST00000319410 TADA2BQ86TJ2 420 aa11.18□□□□□ -0.62
KARS-202ENST00000319410 ZNF333Q96JL9 665 aa11.18□□□□□ -0.62
KARS-202ENST00000319410 KCNF1Q9H3M0 494 aa11.18□□□□□ -0.62
KARS-202ENST00000319410 CHCHD3Q9NX63 227 aaKnown RBP11.18□□□□□ -0.62
KARS-202ENST00000319410 ZNF215Q9UL58 517 aaPredicted RBP11.18□□□□□ -0.62
KARS-202ENST00000319410 ZBTB21Q9ULJ3 1066 aa11.18□□□□□ -0.62
KARS-202ENST00000319410 GABRQQ9UN88 632 aa11.18□□□□□ -0.62
KARS-202ENST00000319410 TMCO5BA8MYB1 307 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 GH2P01242 217 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 ELF2Q15723 593 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 ZYXQ15942 572 aaKnown RBP11.17□□□□□ -0.62
KARS-202ENST00000319410 CEP135Q66GS9 1140 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 TATDN1Q6P1N9 297 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 C16orf45Q96MC5 204 aaPredicted RBP11.17□□□□□ -0.62
KARS-202ENST00000319410 DSCC1Q9BVC3 393 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 UBXN6Q9BZV1 441 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 SRRDQ9UH36 339 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 MYPNQ86TC9 1320 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 ROBO3Q96MS0 1386 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 USP17L12C9JPN9 530 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 USP17L21D6R901 530 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 SLU7O95391 586 aaKnown RBP11.17□□□□□ -0.62
KARS-202ENST00000319410 ASNSP08243 561 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 CYP2D6P10635 497 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 NT5C2P49902 561 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 TBC1D8BQ0IIM8 1120 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 TMCO3Q6UWJ1 677 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 CWC27Q6UX04 472 aaKnown RBP11.17□□□□□ -0.62
KARS-202ENST00000319410 PPP4R3CPQ6ZMV5 832 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 EPB41L4AQ9HCS5 686 aaPredicted RBP11.17□□□□□ -0.62
KARS-202ENST00000319410 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
KARS-202ENST00000319410 SMIM22K7EJ46 135 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 MTFR1Q15390 333 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
KARS-202ENST00000319410 RAET1EQ8TD07 263 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 KIF2CQ99661 725 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 NAPBQ9H115 298 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 ZNF287Q9HBT7 754 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 SLC24A3Q9HC58 644 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 FOXP2O15409 715 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 CDC45O75419 566 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 HSPD1P10809 573 aaKnown RBP11.16□□□□□ -0.62
KARS-202ENST00000319410 FCGRTP55899 365 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 BACE1P56817 501 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 PSMD2Q13200 908 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 MYBPC2Q14324 1141 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 C16orf86Q6ZW13 317 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 ZNF589Q86UQ0 364 aaPredicted RBP11.16□□□□□ -0.62
KARS-202ENST00000319410 EXOC8Q8IYI6 725 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 ZNF483Q8TF39 744 aaPredicted RBP11.16□□□□□ -0.62
KARS-202ENST00000319410 CCDC17Q96LX7 622 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 ASCC2Q9H1I8 757 aaPredicted RBP11.16□□□□□ -0.62
KARS-202ENST00000319410 AS3MTQ9HBK9 375 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 LOC285556D6RIA3 1793 aa11.16□□□□□ -0.62
KARS-202ENST00000319410 SLC3A2P08195 630 aaKnown RBP11.15□□□□□ -0.62
KARS-202ENST00000319410 LMAN1P49257 510 aa11.15□□□□□ -0.62
KARS-202ENST00000319410 CCDC129Q6ZRS4 1044 aa11.15□□□□□ -0.62
KARS-202ENST00000319410 SLC44A5Q8NCS7 719 aa11.15□□□□□ -0.62
KARS-202ENST00000319410 TMEM106CQ9BVX2 250 aa11.15□□□□□ -0.62
KARS-202ENST00000319410 SLC45A1Q9Y2W3 748 aa11.15□□□□□ -0.62
KARS-202ENST00000319410 MGAMO43451 1857 aa11.15□□□□□ -0.62
KARS-202ENST00000319410 CYP2D7A0A087X1C5 515 aa11.15□□□□□ -0.63
KARS-202ENST00000319410 TNPO2O14787 897 aaKnown RBP11.15□□□□□ -0.63
KARS-202ENST00000319410 ZRANB2O95218 330 aaKnown RBP eCLIP11.15□□□□□ -0.63
KARS-202ENST00000319410 PCP11498 1178 aaKnown RBP11.15□□□□□ -0.63
KARS-202ENST00000319410 ELNP15502 786 aa11.15□□□□□ -0.63
KARS-202ENST00000319410 SHMT1P34896 483 aa11.15□□□□□ -0.63
KARS-202ENST00000319410 RPS6KA3P51812 740 aa11.15□□□□□ -0.63
KARS-202ENST00000319410 TPD52L1Q16890 204 aaPredicted RBP11.15□□□□□ -0.63
KARS-202ENST00000319410 REXO1L1PQ8IX06 675 aa11.15□□□□□ -0.63
KARS-202ENST00000319410 CTCFLQ8NI51 663 aaPredicted RBP11.15□□□□□ -0.63
KARS-202ENST00000319410 DDX11Q96FC9 970 aa11.15□□□□□ -0.63
KARS-202ENST00000319410 WDR18Q9BV38 432 aa11.15□□□□□ -0.63
KARS-202ENST00000319410 TMOD4Q9NZQ9 345 aa11.15□□□□□ -0.63
KARS-202ENST00000319410 BIN2Q9UBW5 565 aaPredicted RBP11.15□□□□□ -0.63
KARS-202ENST00000319410 USP17L10C9JJH3 530 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 GNRH1P01148 92 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 FGAP02671 866 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 GRK4P32298 578 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 FLT3LGP49771 235 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 CLCN6P51797 869 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 SLC5A9Q2M3M2 681 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 CERKLQ49MI3 558 aaPredicted RBP11.14□□□□□ -0.63
KARS-202ENST00000319410 SH3D19Q5HYK7 790 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 FILIP1Q7Z7B0 1213 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 DRAXINQ8NBI3 349 aaPredicted RBP11.14□□□□□ -0.63
KARS-202ENST00000319410 ACER1Q8TDN7 264 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 DYNLL2Q96FJ2 89 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 PNMA3Q9UL41 463 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 FGRP09769 529 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 HOXD10P28358 340 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 PRPHP41219 470 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 ABCB5Q2M3G0 1257 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 VPS53Q5VIR6 699 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 MICALL1Q8N3F8 863 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 P2RX7Q99572 595 aaKnown RBP11.14□□□□□ -0.63
KARS-202ENST00000319410 ESYT1Q9BSJ8 1104 aa11.14□□□□□ -0.63
KARS-202ENST00000319410 EMILIN3Q9NT22 766 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms