RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 SLC39A14Q15043 492 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 KRT25Q7Z3Z0 450 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 P2RX7Q99572 595 aaKnown RBP20.31■□□□□ 0.84
CCDC115-201ENST00000259229 PSTPIP2Q9H939 334 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.31■□□□□ 0.84
CCDC115-201ENST00000259229 BIN2Q9UBW5 565 aaPredicted RBP20.31■□□□□ 0.84
CCDC115-201ENST00000259229 MYPNQ86TC9 1320 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 USP17L15C9J2P7 530 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 USP17L13C9JLJ4 530 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 USP17L11C9JVI0 530 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 USP17L18D6R9N7 530 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 USP17L22D6RA61 530 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 USP17L17D6RBQ6 530 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 USP17L19D6RCP7 530 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 USP17L20D6RJB6 530 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 VWA5AO00534 786 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 KIF3CO14782 793 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 EDIL3O43854 480 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 TRAPPC10P48553 1259 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 UBE2HP62256 183 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 USP17L24Q0WX57 530 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 JAKMIP3Q5VZ66 844 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 AGBL1Q96MI9 1066 aa20.31■□□□□ 0.84
CCDC115-201ENST00000259229 CCDC194A0A1B0GVG4 234 aa20.3■□□□□ 0.84
CCDC115-201ENST00000259229 SPDYE16A6NNV3 312 aaPredicted RBP20.3■□□□□ 0.84
CCDC115-201ENST00000259229 USP17L6PQ6QN14 398 aa20.3■□□□□ 0.84
CCDC115-201ENST00000259229 POTEEQ6S8J3 1075 aa20.3■□□□□ 0.84
CCDC115-201ENST00000259229 NOL7Q9UMY1 257 aaKnown RBP20.3■□□□□ 0.84
CCDC115-201ENST00000259229 PASKQ96RG2 1323 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 SPTLC2O15270 562 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 HOXA7P31268 230 aaPredicted RBP20.29■□□□□ 0.84
CCDC115-201ENST00000259229 MRPL12P52815 198 aaKnown RBP20.29■□□□□ 0.84
CCDC115-201ENST00000259229 COG2Q14746 738 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 STK38Q15208 465 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 INF2Q27J81 1249 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 KLHL40Q2TBA0 621 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 TTC38Q5R3I4 469 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 C2orf69Q8N8R5 385 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 KCNG4Q8TDN1 519 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 SLC10A4Q96EP9 437 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 MORC2Q9Y6X9 1032 aaPredicted RBP20.29■□□□□ 0.84
CCDC115-201ENST00000259229 ABCB11O95342 1321 aa20.29■□□□□ 0.84
CCDC115-201ENST00000259229 FDX1P10109 184 aa20.28■□□□□ 0.84
CCDC115-201ENST00000259229 ATP2B1P20020 1258 aa20.28■□□□□ 0.84
CCDC115-201ENST00000259229 TRAF1Q13077 416 aa20.28■□□□□ 0.84
CCDC115-201ENST00000259229 NONOQ15233 471 aaKnown RBP eCLIP20.28■□□□□ 0.84
CCDC115-201ENST00000259229 GADL1Q6ZQY3 521 aa20.28■□□□□ 0.84
CCDC115-201ENST00000259229 GLT8D2Q9H1C3 349 aa20.28■□□□□ 0.84
CCDC115-201ENST00000259229 RAVER2Q9HCJ3 691 aaKnown RBP20.28■□□□□ 0.84
CCDC115-201ENST00000259229 ZNF214Q9UL59 606 aaPredicted RBP20.28■□□□□ 0.84
CCDC115-201ENST00000259229 CCPG1Q9ULG6 757 aa20.28■□□□□ 0.84
CCDC115-201ENST00000259229 PCDHA7Q9UN72 937 aa20.28■□□□□ 0.84
CCDC115-201ENST00000259229 PIK3CDO00329 1044 aa20.27■□□□□ 0.84
CCDC115-201ENST00000259229 PPP6R2O75170 966 aa20.27■□□□□ 0.84
CCDC115-201ENST00000259229 AXDND1Q5T1B0 1012 aaPredicted RBP20.27■□□□□ 0.84
CCDC115-201ENST00000259229 GPAT2Q6NUI2 795 aa20.27■□□□□ 0.84
CCDC115-201ENST00000259229 ZNF784Q8NCA9 323 aaPredicted RBP20.27■□□□□ 0.84
CCDC115-201ENST00000259229 TBCKQ8TEA7 893 aa20.27■□□□□ 0.84
CCDC115-201ENST00000259229 CLEC4DQ8WXI8 215 aa20.27■□□□□ 0.84
CCDC115-201ENST00000259229 GPBP1L1Q9HC44 474 aaPredicted RBP20.27■□□□□ 0.84
CCDC115-201ENST00000259229 AGTPBP1Q9UPW5 1226 aa20.27■□□□□ 0.84
CCDC115-201ENST00000259229 MRVI1Q9Y6F6 885 aa20.27■□□□□ 0.84
CCDC115-201ENST00000259229 DDX49Q9Y6V7 483 aaKnown RBP20.27■□□□□ 0.84
CCDC115-201ENST00000259229 SKOR2Q2VWA4 1001 aaPredicted RBP20.27■□□□□ 0.83
CCDC115-201ENST00000259229 TBC1D5Q92609 795 aa20.27■□□□□ 0.83
CCDC115-201ENST00000259229 MS4A4AQ96JQ5 239 aa20.27■□□□□ 0.83
CCDC115-201ENST00000259229 MRPL11Q9Y3B7 192 aaKnown RBP20.27■□□□□ 0.83
CCDC115-201ENST00000259229 ATP2A1O14983 1001 aa20.26■□□□□ 0.83
CCDC115-201ENST00000259229 ZBED4O75132 1171 aa20.26■□□□□ 0.83
CCDC115-201ENST00000259229 MBD3O95983 291 aa20.26■□□□□ 0.83
CCDC115-201ENST00000259229 MARCKSP29966 332 aaPredicted RBP20.26■□□□□ 0.83
CCDC115-201ENST00000259229 GHRHRQ02643 423 aa20.26■□□□□ 0.83
CCDC115-201ENST00000259229 TMEM132BQ14DG7 1078 aa20.26■□□□□ 0.83
CCDC115-201ENST00000259229 ZNF174Q15697 407 aa20.26■□□□□ 0.83
CCDC115-201ENST00000259229 TEX2Q8IWB9 1127 aa20.26■□□□□ 0.83
CCDC115-201ENST00000259229 CPXCR1Q8N123 301 aa20.26■□□□□ 0.83
CCDC115-201ENST00000259229 FBXO2Q9UK22 296 aaPredicted RBP20.26■□□□□ 0.83
CCDC115-201ENST00000259229 ME1P48163 572 aa20.25■□□□□ 0.83
CCDC115-201ENST00000259229 OAZ1P54368 228 aa20.25■□□□□ 0.83
CCDC115-201ENST00000259229 AP3B2Q13367 1082 aa20.25■□□□□ 0.83
CCDC115-201ENST00000259229 SNAPC2Q13487 334 aa20.25■□□□□ 0.83
CCDC115-201ENST00000259229 NEK8Q86SG6 692 aa20.25■□□□□ 0.83
CCDC115-201ENST00000259229 C4orf32Q8N8J7 132 aa20.25■□□□□ 0.83
CCDC115-201ENST00000259229 CRYGNQ8WXF5 182 aa20.25■□□□□ 0.83
CCDC115-201ENST00000259229 ANO3Q9BYT9 981 aa20.25■□□□□ 0.83
CCDC115-201ENST00000259229 NFIBO00712 420 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 HOXA13P31271 388 aaPredicted RBP20.24■□□□□ 0.83
CCDC115-201ENST00000259229 ATP2C1P98194 919 aaPredicted RBP20.24■□□□□ 0.83
CCDC115-201ENST00000259229 MUM1L1Q5H9M0 696 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 LBX2Q6XYB7 198 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 FASTKD5Q7L8L6 764 aaKnown RBP20.24■□□□□ 0.83
CCDC115-201ENST00000259229 ASCC2Q9H1I8 757 aaPredicted RBP20.24■□□□□ 0.83
CCDC115-201ENST00000259229 HOXC10Q9NYD6 342 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 RIPK3Q9Y572 518 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 LCTP09848 1927 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 LIG1P18858 919 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 MCM7P33993 719 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 HSD17B4P51659 736 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 GRIN1Q05586 938 aa20.24■□□□□ 0.83
CCDC115-201ENST00000259229 TPRNQ4KMQ1 711 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms