RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 PSTPIP2Q9H939 334 aa21.49■■□□□ 1.03
TRIM47-201ENST00000254816 CTNND1O60716 968 aaKnown RBP21.48■■□□□ 1.03
TRIM47-201ENST00000254816 KRBA2Q6ZNG9 492 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 NEK8Q86SG6 692 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 SH2D4AQ9H788 454 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 A0A087X0B3 334 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 USP17L15C9J2P7 530 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 USP17L13C9JLJ4 530 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 USP17L11C9JVI0 530 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 USP17L18D6R9N7 530 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 USP17L22D6RA61 530 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 USP17L17D6RBQ6 530 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 USP17L19D6RCP7 530 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 USP17L20D6RJB6 530 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 CLK2P49760 499 aaKnown RBP21.48■■□□□ 1.03
TRIM47-201ENST00000254816 USP17L24Q0WX57 530 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 USP17L6PQ6QN14 398 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 FBXO11Q86XK2 927 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 CNNM3Q8NE01 707 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 ZKSCAN4Q969J2 545 aaPredicted RBP21.48■■□□□ 1.03
TRIM47-201ENST00000254816 KIFC2Q96AC6 838 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 AMNQ9BXJ7 453 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 KIAA1468Q9P260 1216 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 SERTAD1Q9UHV2 236 aa21.48■■□□□ 1.03
TRIM47-201ENST00000254816 FOXN1O15353 648 aa21.47■■□□□ 1.03
TRIM47-201ENST00000254816 ZNF500O60304 480 aaPredicted RBP21.47■■□□□ 1.03
TRIM47-201ENST00000254816 LMOD1P29536 600 aaPredicted RBP21.47■■□□□ 1.03
TRIM47-201ENST00000254816 FBXO28Q9NVF7 368 aa21.47■■□□□ 1.03
TRIM47-201ENST00000254816 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.47■■□□□ 1.03
TRIM47-201ENST00000254816 AP5Z1O43299 807 aa21.46■■□□□ 1.03
TRIM47-201ENST00000254816 MRPL12P52815 198 aaKnown RBP21.46■■□□□ 1.03
TRIM47-201ENST00000254816 PNOCQ13519 176 aa21.46■■□□□ 1.03
TRIM47-201ENST00000254816 DCAF15Q66K64 600 aa21.46■■□□□ 1.03
TRIM47-201ENST00000254816 EDIL3O43854 480 aa21.46■■□□□ 1.03
TRIM47-201ENST00000254816 WRNIP1Q96S55 665 aa21.46■■□□□ 1.03
TRIM47-201ENST00000254816 SSC5DA1L4H1 1573 aa21.46■■□□□ 1.03
TRIM47-201ENST00000254816 BIN1O00499 593 aa21.45■■□□□ 1.02
TRIM47-201ENST00000254816 OFD1O75665 1012 aa21.45■■□□□ 1.02
TRIM47-201ENST00000254816 CDC25AP30304 524 aa21.45■■□□□ 1.02
TRIM47-201ENST00000254816 PRKG1Q13976 671 aa21.45■■□□□ 1.02
TRIM47-201ENST00000254816 CCDC174Q6PII3 467 aa21.45■■□□□ 1.02
TRIM47-201ENST00000254816 C11orf57Q6ZUT1 292 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-201ENST00000254816 ZNF830Q96NB3 372 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-201ENST00000254816 ADARB2Q9NS39 739 aaKnown RBP21.45■■□□□ 1.02
TRIM47-201ENST00000254816 ARL6IP4Q66PJ3 421 aaKnown RBP21.45■■□□□ 1.02
TRIM47-201ENST00000254816 STX1AQ16623 288 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 ISM2Q6H9L7 571 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 LUZP1Q86V48 1076 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 GRAMD1CQ8IYS0 662 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 FAM200AQ8TCP9 573 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 DHX58Q96C10 678 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 CBX8Q9HC52 389 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 PHIPQ8WWQ0 1821 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 TDP2O95551 362 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 DTHD1Q6ZMT9 781 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 CHURC1Q8WUH1 139 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 ZNF112Q9UJU3 913 aa21.44■■□□□ 1.02
TRIM47-201ENST00000254816 ACTN4O43707 911 aaKnown RBP21.43■■□□□ 1.02
TRIM47-201ENST00000254816 NEMFO60524 1076 aa21.43■■□□□ 1.02
TRIM47-201ENST00000254816 MEIS2O14770 477 aa21.43■■□□□ 1.02
TRIM47-201ENST00000254816 PRR29P0C7W0 189 aa21.43■■□□□ 1.02
TRIM47-201ENST00000254816 MTMR2Q13614 643 aa21.43■■□□□ 1.02
TRIM47-201ENST00000254816 GPR162Q16538 588 aa21.43■■□□□ 1.02
TRIM47-201ENST00000254816 SCYL3Q8IZE3 742 aa21.43■■□□□ 1.02
TRIM47-201ENST00000254816 P2RX7Q99572 595 aaKnown RBP21.43■■□□□ 1.02
TRIM47-201ENST00000254816 PP2D1A8MPX8 630 aa21.42■■□□□ 1.02
TRIM47-201ENST00000254816 ZNF165P49910 485 aa21.42■■□□□ 1.02
TRIM47-201ENST00000254816 FEM1BQ9UK73 627 aa21.42■■□□□ 1.02
TRIM47-201ENST00000254816 OPLAHO14841 1288 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 SLC37A4O43826 429 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 OR52Z1P0C646 297 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 LONP1P36776 959 aaKnown RBP21.41■■□□□ 1.02
TRIM47-201ENST00000254816 MDM2Q00987 491 aaPredicted RBP21.41■■□□□ 1.02
TRIM47-201ENST00000254816 SPP2Q13103 211 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.41■■□□□ 1.02
TRIM47-201ENST00000254816 HOOK2Q96ED9 719 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 KIAA1683Q9H0B3 1180 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 RANBP17Q9H2T7 1088 aaKnown RBP21.41■■□□□ 1.02
TRIM47-201ENST00000254816 ADM5C9JUS6 153 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 FAM160B2Q86V87 743 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 GINM1Q9NU53 330 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 ANO10Q9NW15 660 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 PPP2R3BQ9Y5P8 575 aa21.41■■□□□ 1.02
TRIM47-201ENST00000254816 LAD1O00515 517 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 DPCR1Q3MIW9 517 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 KLRG1Q96E93 195 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 EMILIN3Q9NT22 766 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 PITPNM2Q9BZ72 1349 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 PTPRAP18433 802 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 HOXA13P31271 388 aaPredicted RBP21.4■■□□□ 1.02
TRIM47-201ENST00000254816 POSTNQ15063 836 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 ANO3Q9BYT9 981 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 GLT8D2Q9H1C3 349 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 TTC12Q9H892 705 aaPredicted RBP21.4■■□□□ 1.02
TRIM47-201ENST00000254816 PICK1Q9NRD5 415 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 PCDHA5Q9Y5H7 936 aa21.4■■□□□ 1.02
TRIM47-201ENST00000254816 PARP14Q460N5 1801 aa21.39■■□□□ 1.02
TRIM47-201ENST00000254816 WDR46O15213 610 aaKnown RBP21.39■■□□□ 1.02
TRIM47-201ENST00000254816 PLA2G6O60733 806 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms