RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PDE6CP51160 858 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 TTC19Q6DKK2 380 aaPredicted RBP20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 RUFY4Q6ZNE9 571 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 SRP68Q9UHB9 627 aaKnown RBP20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 PPP2R2CQ9Y2T4 447 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 TXNDC9O14530 226 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 LCORLQ8N3X6 602 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 RABGAP1Q9Y3P9 1069 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 ENC1O14682 589 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 NRBP1Q9UHY1 535 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 NPC1L1Q9UHC9 1359 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 CLIC2O15247 247 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 CMA1P23946 247 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 INPP5BP32019 993 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 KMT5BQ4FZB7 885 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 FAM26FQ5R3K3 315 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 CCDC62Q6P9F0 684 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 DCLK2Q8N568 766 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 MYRIPQ8NFW9 859 aa20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 SOS2Q07890 1332 aaPredicted RBP20.51■□□□□ 0.87
SMARCC1-201ENST00000254480 SERPINB2P05120 415 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 USP17L8P0C7I0 530 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 LRCH2Q5VUJ6 765 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 PUS7LQ9H0K6 701 aaKnown RBP20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 RASSF7Q02833 373 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 DIXDC1Q155Q3 683 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 B4GALNT4Q76KP1 1039 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 LPXNO60711 386 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 MLH3Q9UHC1 1453 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 DCAF15Q66K64 600 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 CEP128Q6ZU80 1094 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 ADPGKQ9BRR6 497 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 NR5A1Q13285 461 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 SLFNL1Q499Z3 407 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 PIGSQ96S52 555 aa20.5■□□□□ 0.87
SMARCC1-201ENST00000254480 METP08581 1390 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 NKX1-1Q15270 411 aaPredicted RBP20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 USP17L2Q6R6M4 530 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 BLMP54132 1417 aaPredicted RBP20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 RGS16O15492 202 aaPredicted RBP20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 DDAH1O94760 285 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 CD2BP2O95400 341 aaKnown RBP20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 TTBK2Q6IQ55 1244 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 HACE1Q8IYU2 909 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 NXNQ6DKJ4 435 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 ATF5Q9Y2D1 282 aaPredicted RBP20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 TMEM94Q12767 1356 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 MYOM2P54296 1465 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 GTPBP6O43824 516 aaPredicted RBP20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 ADCY1Q08828 1119 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 CNOT6LQ96LI5 555 aaKnown RBP20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 FAM193BQ96PV7 902 aaPredicted RBP20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 PLEKHF1Q96S99 279 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 AKT3Q9Y243 479 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 XDHP47989 1333 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 TUBB2AQ13885 445 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 DPP9Q86TI2 863 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 ZNF577Q9BSK1 485 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 TUBB2BQ9BVA1 445 aa20.49■□□□□ 0.87
SMARCC1-201ENST00000254480 HNRNPDLO14979 420 aaKnown RBP20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 STX2P32856 288 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 OSTNP61366 133 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 EHHADHQ08426 723 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 CUL4BQ13620 913 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 LRRN2O75325 713 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 CCDC13Q8IYE1 715 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 COL4A3BPQ9Y5P4 624 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 CASP14P31944 242 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 MESDQ14696 234 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 UBE2SQ16763 222 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 MCF2L2Q86YR7 1114 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 PCDHA5Q9Y5H7 936 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 UNC13AQ9UPW8 1703 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 PEG3Q9GZU2 1588 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 PALM3A6NDB9 673 aaPredicted RBP20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 PPP2R5AQ15172 486 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 LGSNQ5TDP6 509 aa20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 RSRC1Q96IZ7 334 aaKnown RBP20.48■□□□□ 0.87
SMARCC1-201ENST00000254480 TSTA3Q13630 321 aaPredicted RBP20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 TSKSQ9UJT2 592 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 ZMYM1Q5SVZ6 1142 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 APOA5Q6Q788 366 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 TRIM58Q8NG06 486 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 RAB17Q9H0T7 212 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 NUCKS1Q9H1E3 243 aaKnown RBP20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 RASSF4Q9H2L5 321 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 IWS1Q96ST2 819 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 TACO1Q9BSH4 297 aaKnown RBP20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 YWHAEP62258 255 aaKnown RBP20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 AIFM3Q96NN9 605 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 BCL2L12Q9HB09 334 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 LARSQ9P2J5 1176 aaKnown RBP20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 INSRP06213 1382 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 OATP04181 439 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 UBE3CQ15386 1083 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 CCDC170Q8IYT3 715 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 CNKSR1Q969H4 720 aa20.47■□□□□ 0.87
SMARCC1-201ENST00000254480 USP17L3A6NCW0 530 aa20.46■□□□□ 0.87
SMARCC1-201ENST00000254480 USP17L4A6NCW7 530 aa20.46■□□□□ 0.87
SMARCC1-201ENST00000254480 ZMYND10O75800 440 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 210.4 ms