RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 ADCY2Q08462 1091 aa20.26■□□□□ 0.83
PTPN12-201ENST00000248594 KSR1Q8IVT5 923 aa20.26■□□□□ 0.83
PTPN12-201ENST00000248594 IFFO1Q0D2I5 559 aa20.26■□□□□ 0.83
PTPN12-201ENST00000248594 SMIM24O75264 130 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 MEX3CQ5U5Q3 659 aaKnown RBP20.25■□□□□ 0.83
PTPN12-201ENST00000248594 ZNF496Q96IT1 587 aaPredicted RBP20.25■□□□□ 0.83
PTPN12-201ENST00000248594 TRIM75PA6NK02 468 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 A6NNZ2 444 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 PDHA1P08559 390 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 RASSF7Q02833 373 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 KRT71Q3SY84 523 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 TUBB8Q3ZCM7 444 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 ALS2CR12Q96Q35 445 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 PUS3Q9BZE2 481 aaKnown RBP20.25■□□□□ 0.83
PTPN12-201ENST00000248594 KAT6BQ8WYB5 2073 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 VIMP08670 466 aaKnown RBP20.25■□□□□ 0.83
PTPN12-201ENST00000248594 RANBP1P43487 201 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 TBC1D10CQ8IV04 446 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 MB21D1Q8N884 522 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 LBHD1Q9BQE6 289 aaPredicted RBP20.25■□□□□ 0.83
PTPN12-201ENST00000248594 MMRN2Q9H8L6 949 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 PEAK1Q9H792 1746 aa20.25■□□□□ 0.83
PTPN12-201ENST00000248594 KLHL33A6NCF5 533 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 DCDC2CA8MYV0 355 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 ADORA1P30542 326 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 MAGOHP61326 146 aaKnown RBP20.24■□□□□ 0.83
PTPN12-201ENST00000248594 CTDSPL2Q05D32 466 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 SPAG1Q07617 926 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 HLFQ16534 295 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 SPICE1Q8N0Z3 855 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 ARFGAP2Q8N6H7 521 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 MAGOHBQ96A72 148 aaKnown RBP20.24■□□□□ 0.83
PTPN12-201ENST00000248594 HYOU1Q9Y4L1 999 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 JCADQ9P266 1359 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
PTPN12-201ENST00000248594 TLDC1Q6P9B6 456 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 AGAP11Q8TF27 550 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 RAPGEF5Q92565 580 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 PANK4Q9NVE7 773 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 THRAP3Q9Y2W1 955 aaKnown RBP20.24■□□□□ 0.83
PTPN12-201ENST00000248594 ADAMTS13Q76LX8 1427 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 NUTM2BA6NNL0 878 aaPredicted RBP20.24■□□□□ 0.83
PTPN12-201ENST00000248594 NUTM2EB1AL46 878 aaPredicted RBP20.24■□□□□ 0.83
PTPN12-201ENST00000248594 ARID4AP29374 1257 aaPredicted RBP20.24■□□□□ 0.83
PTPN12-201ENST00000248594 C11orf91Q3C1V1 193 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 RILPL1Q5EBL4 403 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 C3orf20Q8ND61 904 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 PIK3R5Q8WYR1 880 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 GOPCQ9HD26 462 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 SLC4A4Q9Y6R1 1079 aa20.24■□□□□ 0.83
PTPN12-201ENST00000248594 EVI5O60447 810 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 CTNND1O60716 968 aaKnown RBP20.23■□□□□ 0.83
PTPN12-201ENST00000248594 RWDD2BP57060 319 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 TRIM14Q14142 442 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 MMGT1Q8N4V1 131 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 TRIM58Q8NG06 486 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 COPRSQ9NQ92 184 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 PXDNLA1KZ92 1463 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 PRCPP42785 496 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 ZAP70P43403 619 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 YTHDF3Q7Z739 585 aaKnown RBP20.23■□□□□ 0.83
PTPN12-201ENST00000248594 ELAC2Q9BQ52 826 aaKnown RBP20.23■□□□□ 0.83
PTPN12-201ENST00000248594 A8MUI8 341 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 CASKIN2Q8WXE0 1202 aa20.23■□□□□ 0.83
PTPN12-201ENST00000248594 SRPRBQ9Y5M8 271 aaKnown RBP20.23■□□□□ 0.83
PTPN12-201ENST00000248594 MAGEA1P43355 309 aa20.22■□□□□ 0.83
PTPN12-201ENST00000248594 MYH10P35580 1976 aa20.22■□□□□ 0.83
PTPN12-201ENST00000248594 PYGLP06737 847 aa20.22■□□□□ 0.83
PTPN12-201ENST00000248594 MAP3K12Q12852 859 aa20.22■□□□□ 0.83
PTPN12-201ENST00000248594 ANKRD13DQ6ZTN6 518 aa20.22■□□□□ 0.83
PTPN12-201ENST00000248594 CEP131Q9UPN4 1083 aa20.22■□□□□ 0.83
PTPN12-201ENST00000248594 C15orf41Q9Y2V0 281 aa20.22■□□□□ 0.83
PTPN12-201ENST00000248594 PMS1P54277 932 aaKnown RBP20.21■□□□□ 0.83
PTPN12-201ENST00000248594 ITGB3BPQ13352 177 aaPredicted RBP20.21■□□□□ 0.83
PTPN12-201ENST00000248594 PLCB4Q15147 1175 aa20.21■□□□□ 0.83
PTPN12-201ENST00000248594 IQCKQ8N0W5 287 aa20.21■□□□□ 0.83
PTPN12-201ENST00000248594 MMP1P03956 469 aa20.21■□□□□ 0.83
PTPN12-201ENST00000248594 EPB41P11171 864 aaKnown RBP20.21■□□□□ 0.83
PTPN12-201ENST00000248594 MCM7P33993 719 aa20.21■□□□□ 0.83
PTPN12-201ENST00000248594 EHHADHQ08426 723 aa20.21■□□□□ 0.83
PTPN12-201ENST00000248594 SCARF1Q14162 830 aa20.21■□□□□ 0.83
PTPN12-201ENST00000248594 NT5DC1Q5TFE4 455 aa20.21■□□□□ 0.83
PTPN12-201ENST00000248594 CNOT8Q9UFF9 292 aaKnown RBP20.21■□□□□ 0.83
PTPN12-201ENST00000248594 LIMA1Q9UHB6 759 aaKnown RBP20.21■□□□□ 0.83
PTPN12-201ENST00000248594 USP4Q13107 963 aa20.21■□□□□ 0.83
PTPN12-201ENST00000248594 NUCKS1Q9H1E3 243 aaKnown RBP20.21■□□□□ 0.83
PTPN12-201ENST00000248594 CHD2O14647 1828 aaKnown RBP20.21■□□□□ 0.83
PTPN12-201ENST00000248594 EIF4A3P38919 411 aaKnown RBP20.2■□□□□ 0.82
PTPN12-201ENST00000248594 HOOK2Q96ED9 719 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 GOLPH3Q9H4A6 298 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 HMGB1P1B2RPK0 211 aaPredicted RBP20.2■□□□□ 0.82
PTPN12-201ENST00000248594 CFAP221Q4G0U5 840 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 RCSD1Q6JBY9 416 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 C6orf89Q6UWU4 347 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 TTC5Q8N0Z6 440 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 FNBP4Q8N3X1 1017 aaPredicted RBP20.2■□□□□ 0.82
PTPN12-201ENST00000248594 GSDMAQ96QA5 445 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 PCDHA13Q9Y5I0 950 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 ITIH6Q6UXX5 1313 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms