RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 TTC38Q5R3I4 469 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 RESP18Q5W5W9 173 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 METTL16Q86W50 562 aaKnown RBP11.3□□□□□ -0.6
ATM-226ENST00000638443 RRP36Q96EU6 259 aaKnown RBP11.3□□□□□ -0.6
ATM-226ENST00000638443 ZBED3Q96IU2 234 aaPredicted RBP11.3□□□□□ -0.6
ATM-226ENST00000638443 CCDC17Q96LX7 622 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 RIOX1Q9H6W3 641 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 PCDHA6Q9UN73 950 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 PCDHA8Q9Y5H6 950 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 TRIM75PA6NK02 468 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 USP17L10C9JJH3 530 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 GMPSP49915 693 aaPredicted RBP11.3□□□□□ -0.6
ATM-226ENST00000638443 SNAP25P60880 206 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 TBC1D10BQ4KMP7 808 aaPredicted RBP11.3□□□□□ -0.6
ATM-226ENST00000638443 ASPRV1Q53RT3 343 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 C11orf57Q6ZUT1 292 aaPredicted RBP11.3□□□□□ -0.6
ATM-226ENST00000638443 FOXP4Q8IVH2 680 aaPredicted RBP11.3□□□□□ -0.6
ATM-226ENST00000638443 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 ADGRF4Q8IZF3 695 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 GPATCH11Q8N954 259 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 FAM151AQ8WW52 585 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 CSRNP2Q9H175 543 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 JMJD4Q9H9V9 463 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 SEC63Q9UGP8 760 aaKnown RBP11.3□□□□□ -0.6
ATM-226ENST00000638443 USP25Q9UHP3 1055 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 HPSEQ9Y251 543 aa11.3□□□□□ -0.6
ATM-226ENST00000638443 COL2A1P02458 1487 aaPredicted RBP11.3□□□□□ -0.6
ATM-226ENST00000638443 FOXN1O15353 648 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 AP5Z1O43299 807 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 PTPREP23469 700 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 INF2Q27J81 1249 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 FAM43BQ6ZT52 329 aaPredicted RBP11.29□□□□□ -0.6
ATM-226ENST00000638443 TMEM179Q6ZVK1 233 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 LUZP1Q86V48 1076 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 JMYQ8N9B5 988 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 LZTS2Q9BRK4 669 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 GOPCQ9HD26 462 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 TMEM260Q9NX78 707 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 A0A087X0B3 334 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 CUTAO60888 179 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 SYKP43405 635 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 PDILTQ8N807 584 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 ACER1Q8TDN7 264 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 SDF4Q9BRK5 362 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 KANSL2Q9H9L4 492 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 SH3GLB2Q9NR46 395 aa11.29□□□□□ -0.6
ATM-226ENST00000638443 ARFGEF1Q9Y6D6 1849 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 SMCO2A6NFE2 343 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 BIN1O00499 593 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 CALML3P27482 149 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 SLC1A4P43007 532 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 PTGDRQ13258 359 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
ATM-226ENST00000638443 IL17AQ16552 155 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 LONRF3Q496Y0 759 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 SLFN13Q68D06 897 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 ISM2Q6H9L7 571 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 MTMR14Q8NCE2 650 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 CCDC148Q8NFR7 591 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 EPSTI1Q96J88 318 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 GLIS2Q9BZE0 524 aaPredicted RBP11.28□□□□□ -0.6
ATM-226ENST00000638443 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
ATM-226ENST00000638443 ZMYND12Q9H0C1 365 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 NYAP2Q9P242 653 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 BIN2Q9UBW5 565 aaPredicted RBP11.28□□□□□ -0.6
ATM-226ENST00000638443 PGAP2Q9UHJ9 254 aa11.28□□□□□ -0.6
ATM-226ENST00000638443 NOL7Q9UMY1 257 aaKnown RBP11.28□□□□□ -0.6
ATM-226ENST00000638443 CCDC194A0A1B0GVG4 234 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 VWA3AA6NCI4 1184 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 F5H6K3 240 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 FZD9O00144 591 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 NDUFB10O96000 172 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 KLRC3Q07444 240 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 RASA3Q14644 834 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 JAKMIP3Q5VZ66 844 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 SASS6Q6UVJ0 657 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 GRAMD1CQ8IYS0 662 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 CBX8Q9HC52 389 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 KCNH3Q9ULD8 1083 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 FZD1Q9UP38 647 aa11.27□□□□□ -0.6
ATM-226ENST00000638443 SRPRBQ9Y5M8 271 aaKnown RBP11.27□□□□□ -0.6
ATM-226ENST00000638443 LTBP3Q9NS15 1303 aa11.27□□□□□ -0.61
ATM-226ENST00000638443 MYO1BO43795 1136 aa11.27□□□□□ -0.61
ATM-226ENST00000638443 TCF3P15923 654 aa11.27□□□□□ -0.61
ATM-226ENST00000638443 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.61
ATM-226ENST00000638443 PNOCQ13519 176 aa11.27□□□□□ -0.61
ATM-226ENST00000638443 UBE2SQ16763 222 aa11.27□□□□□ -0.61
ATM-226ENST00000638443 DAGLBQ8NCG7 672 aa11.27□□□□□ -0.61
ATM-226ENST00000638443 MKL1Q969V6 931 aa11.27□□□□□ -0.61
ATM-226ENST00000638443 TMEM60Q9H2L4 133 aa11.27□□□□□ -0.61
ATM-226ENST00000638443 HERC5Q9UII4 1024 aaKnown RBP11.27□□□□□ -0.61
ATM-226ENST00000638443 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
ATM-226ENST00000638443 POLR2DO15514 142 aaKnown RBP11.26□□□□□ -0.61
ATM-226ENST00000638443 CDC25AP30304 524 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 ZNF280AP59817 542 aaPredicted RBP11.26□□□□□ -0.61
ATM-226ENST00000638443 DGKZQ13574 1117 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms