RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ECT2Q9H8V3 914 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 MED4Q9NPJ6 270 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 DNAJC17Q9NVM6 304 aaKnown RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 DBF4Q9UBU7 674 aaPredicted RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 G3BP2Q9UN86 482 aaKnown RBP6.55□□□□□ -1.36
SCN1A-212ENST00000636194 SLC4A7Q9Y6M7 1214 aa6.55□□□□□ -1.36
SCN1A-212ENST00000636194 RHOBTB1O94844 696 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 GRAMD4Q6IC98 578 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 ANKS3Q6ZW76 656 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 ZBTB8OSQ8IWT0 167 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 CCDC13Q8IYE1 715 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 TCP11L2Q8N4U5 519 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 LZTS2Q9BRK4 669 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 ALG1Q9BT22 464 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 LRFN2Q9ULH4 789 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 POTEFA5A3E0 1075 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 DTNBO60941 627 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 NSFP46459 744 aaKnown RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 MTERF2Q49AM1 385 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 MEI1Q5TIA1 1274 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 ATL3Q6DD88 541 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 NME8Q8N427 588 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 PPP2R3CQ969Q6 453 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 CABS1Q96KC9 395 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 SPZ1Q9BXG8 430 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 KLHL31Q9H511 634 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 PDZRN3Q9UPQ7 1066 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 CADPSQ9ULU8 1353 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 TMEM191CA6NGB0 347 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 TMEM191BP0C7N4 346 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 MCCD1P59942 119 aaPredicted RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 CAPRIN1Q14444 709 aaKnown RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 NBPF10Q6P3W6 841 aaKnown RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 BZW1Q7L1Q6 419 aaKnown RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 FCHSD1Q86WN1 690 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 NBPF15Q8N660 670 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 IARS2Q9NSE4 1012 aaKnown RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 ZNF197O14709 1029 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 IMPDH2P12268 514 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 MCM4P33991 863 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 RASSF7Q02833 373 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 RASIP1Q5U651 963 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 C19orf60Q96EN9 201 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 PARVGQ9HBI0 331 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 RAB20Q9NX57 234 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 CSADQ9Y600 493 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 PYGBP11216 843 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 ANXA13P27216 316 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 KIF23Q02241 960 aaPredicted RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 ESRP1Q6NXG1 681 aaKnown RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 TTC30AQ86WT1 665 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 METTL23Q86XA0 190 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 DMAP1Q9NPF5 467 aaPredicted RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 PACSIN2Q9UNF0 486 aaPredicted RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 ZNF318Q5VUA4 2279 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 HNRNPRO43390 633 aaKnown RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 CD19P15391 556 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 PHKA1P46020 1223 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 DMP1Q13316 513 aaPredicted RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 THOC7Q6I9Y2 204 aaKnown RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 DPY19L2Q6NUT2 758 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 TAGAPQ8N103 731 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 TRIML2Q8N7C3 387 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 MAGEB6P1A0A0J9YX57 407 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 DYNC1I2Q13409 638 aaKnown RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 CEP78Q5JTW2 689 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 BRAPQ7Z569 592 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 FAM81BQ96LP2 452 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 UIMC1Q96RL1 719 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 TUBB6Q9BUF5 446 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 ATG3Q9NT62 314 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 UTP6Q9NYH9 597 aaKnown RBP6.54□□□□□ -1.36
SCN1A-212ENST00000636194 ARHGAP26Q9UNA1 814 aa6.54□□□□□ -1.36
SCN1A-212ENST00000636194 RGS5O15539 181 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 DIAPH2O60879 1101 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 RLBP1P12271 317 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 GUCA1AP43080 201 aaPredicted RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 ART3Q13508 389 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 FAM47CQ5HY64 1035 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 NANOGNBQ7Z5D8 188 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 FBXO41Q8TF61 875 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 MYD88Q99836 296 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 MRPL44Q9H9J2 332 aaKnown RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 NHEJ1Q9H9Q4 299 aaPredicted RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 SUN2Q9UH99 717 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 MYH7P12883 1935 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 PTPDC1A2A3K4 754 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 ZBED4O75132 1171 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 SLC12A1Q13621 1099 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 ZNF568Q3ZCX4 644 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 RRM2BQ7LG56 351 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 FHDC1Q9C0D6 1143 aaPredicted RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 MID2Q9UJV3 735 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 TTF2Q9UNY4 1162 aaKnown RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 AKR1B15C9JRZ8 316 aaPredicted RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 CREB3O43889 395 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 CCNT1O60563 726 aaKnown RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 GUCA1CO95843 209 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms