RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 IGDCC3Q8IVU1 814 aa5.88□□□□□ -1.47
SCN1A-211ENST00000635893 NUP43Q8NFH3 380 aa5.88□□□□□ -1.47
SCN1A-211ENST00000635893 TNFRSF12AQ9NP84 129 aa5.88□□□□□ -1.47
SCN1A-211ENST00000635893 NUDT19A8MXV4 375 aa5.87□□□□□ -1.47
SCN1A-211ENST00000635893 GSNP06396 782 aa5.87□□□□□ -1.47
SCN1A-211ENST00000635893 CEBPAP49715 358 aaPredicted RBP5.87□□□□□ -1.47
SCN1A-211ENST00000635893 SLITRK4Q8IW52 837 aa5.87□□□□□ -1.47
SCN1A-211ENST00000635893 SP8Q8IXZ3 490 aa5.87□□□□□ -1.47
SCN1A-211ENST00000635893 NKD1Q969G9 470 aa5.87□□□□□ -1.47
SCN1A-211ENST00000635893 DHRS1Q96LJ7 313 aa5.87□□□□□ -1.47
SCN1A-211ENST00000635893 SLC9A7Q96T83 725 aa5.87□□□□□ -1.47
SCN1A-211ENST00000635893 NT5C1AQ9BXI3 368 aa5.87□□□□□ -1.47
SCN1A-211ENST00000635893 AP5S1Q9NUS5 200 aa5.87□□□□□ -1.47
SCN1A-211ENST00000635893 PCDHA5Q9Y5H7 936 aa5.87□□□□□ -1.47
SCN1A-211ENST00000635893 VMACQ2NL98 169 aa5.86□□□□□ -1.47
SCN1A-211ENST00000635893 ERICH6BQ5W0A0 696 aa5.86□□□□□ -1.47
SCN1A-211ENST00000635893 INTS3Q68E01 1043 aaKnown RBP5.86□□□□□ -1.47
SCN1A-211ENST00000635893 CRTC3Q6UUV7 619 aa5.86□□□□□ -1.47
SCN1A-211ENST00000635893 TMEM52Q8NDY8 209 aa5.86□□□□□ -1.47
SCN1A-211ENST00000635893 FEZF2Q8TBJ5 459 aa5.86□□□□□ -1.47
SCN1A-211ENST00000635893 EAF1Q96JC9 268 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-211ENST00000635893 IMPACTQ9P2X3 320 aa5.86□□□□□ -1.47
SCN1A-211ENST00000635893 SUCOQ9UBS9 1254 aaKnown RBP5.86□□□□□ -1.47
SCN1A-211ENST00000635893 MRPL58Q14197 206 aaKnown RBP5.85□□□□□ -1.47
SCN1A-211ENST00000635893 NR1I3Q14994 352 aa5.85□□□□□ -1.47
SCN1A-211ENST00000635893 ZNF326Q5BKZ1 582 aaKnown RBP5.85□□□□□ -1.47
SCN1A-211ENST00000635893 RTP2Q5QGT7 225 aa5.85□□□□□ -1.47
SCN1A-211ENST00000635893 RPTNQ6XPR3 784 aa5.85□□□□□ -1.47
SCN1A-211ENST00000635893 C7orf61Q8IZ16 206 aa5.85□□□□□ -1.47
SCN1A-211ENST00000635893 LINC01356Q8N9X3 169 aa5.85□□□□□ -1.47
SCN1A-211ENST00000635893 PWWP2AQ96N64 755 aa5.85□□□□□ -1.47
SCN1A-211ENST00000635893 JMJD8Q96S16 334 aa5.85□□□□□ -1.47
SCN1A-211ENST00000635893 DSCC1Q9BVC3 393 aa5.85□□□□□ -1.47
SCN1A-211ENST00000635893 BCL11AQ9H165 835 aa5.85□□□□□ -1.47
SCN1A-211ENST00000635893 LUC7LQ9NQ29 371 aaKnown RBP5.85□□□□□ -1.47
SCN1A-211ENST00000635893 A0A1W2PQ27 194 aa5.84□□□□□ -1.47
SCN1A-211ENST00000635893 A0A1W2PQ64 194 aa5.84□□□□□ -1.47
SCN1A-211ENST00000635893 A0A1W2PQC6 194 aa5.84□□□□□ -1.47
SCN1A-211ENST00000635893 A0A1W2PQD8 194 aa5.84□□□□□ -1.47
SCN1A-211ENST00000635893 BUB1BO60566 1050 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-211ENST00000635893 MAPKAPK2P49137 400 aa5.84□□□□□ -1.47
SCN1A-211ENST00000635893 HLA-DQA1Q5Y7H0 255 aa5.84□□□□□ -1.47
SCN1A-211ENST00000635893 CWF19L1Q69YN2 538 aaKnown RBP5.84□□□□□ -1.47
SCN1A-211ENST00000635893 ZDHHC14Q8IZN3 488 aa5.84□□□□□ -1.47
SCN1A-211ENST00000635893 NAT16Q8N8M0 369 aa5.84□□□□□ -1.47
SCN1A-211ENST00000635893 BCL2L13Q9BXK5 485 aa5.84□□□□□ -1.47
SCN1A-211ENST00000635893 IRS2Q9Y4H2 1338 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 GSTM1P09488 218 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 NCKAP1LP55160 1127 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 CAP1Q01518 475 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 MVKQ03426 396 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 SKOR2Q2VWA4 1001 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-211ENST00000635893 PLEKHN1Q494U1 663 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-211ENST00000635893 ZC3H14Q6PJT7 736 aaKnown RBP5.83□□□□□ -1.48
SCN1A-211ENST00000635893 DBX2Q6ZNG2 339 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 KIAA0825Q8IV33 1275 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 CCDC144CPQ8IYA2 1237 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 SYT8Q8NBV8 401 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 TEPSINQ96N21 525 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 SLC12A9Q9BXP2 914 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 JAG2Q9Y219 1238 aa5.83□□□□□ -1.48
SCN1A-211ENST00000635893 ZC3H12DA2A288 527 aaKnown RBP5.82□□□□□ -1.48
SCN1A-211ENST00000635893 C9IYK1 514 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 SHOXO15266 292 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 CELA3BP08861 270 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 ACRP10323 421 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 IMPDH2P12268 514 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 PFKLP17858 780 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 PMS1P54277 932 aaKnown RBP5.82□□□□□ -1.48
SCN1A-211ENST00000635893 ANKRD39Q53RE8 183 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 JAMLQ86YT9 394 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 NLGN1Q8N2Q7 840 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 GIPC2Q8TF65 315 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 SMARCC1Q92922 1105 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-211ENST00000635893 SPON2Q9BUD6 331 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 SRRTQ9BXP5 876 aaKnown RBP5.82□□□□□ -1.48
SCN1A-211ENST00000635893 ZNRF3Q9ULT6 936 aa5.82□□□□□ -1.48
SCN1A-211ENST00000635893 FAM86C2PA6NEL3 165 aa5.81□□□□□ -1.48
SCN1A-211ENST00000635893 MSL3P1P0C860 447 aa5.81□□□□□ -1.48
SCN1A-211ENST00000635893 IGFBP6P24592 240 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-211ENST00000635893 NOP2P46087 812 aaKnown RBP5.81□□□□□ -1.48
SCN1A-211ENST00000635893 ZNF200P98182 395 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-211ENST00000635893 TARBP2Q15633 366 aaKnown RBP5.81□□□□□ -1.48
SCN1A-211ENST00000635893 NOL9Q5SY16 702 aaKnown RBP5.81□□□□□ -1.48
SCN1A-211ENST00000635893 PAQR3Q6TCH7 311 aa5.81□□□□□ -1.48
SCN1A-211ENST00000635893 CYP2R1Q6VVX0 501 aa5.81□□□□□ -1.48
SCN1A-211ENST00000635893 FRMD5Q7Z6J6 570 aa5.81□□□□□ -1.48
SCN1A-211ENST00000635893 PRRT2Q7Z6L0 340 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-211ENST00000635893 TAB3Q8N5C8 712 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-211ENST00000635893 TP53I13Q8NBR0 393 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-211ENST00000635893 A0A1W2PQJ5 194 aa5.8□□□□□ -1.48
SCN1A-211ENST00000635893 H0Y8X5 98 aa5.8□□□□□ -1.48
SCN1A-211ENST00000635893 FGF10O15520 208 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-211ENST00000635893 SRGAP3O43295 1099 aa5.8□□□□□ -1.48
SCN1A-211ENST00000635893 CYBBP04839 570 aa5.8□□□□□ -1.48
SCN1A-211ENST00000635893 DBHP09172 617 aa5.8□□□□□ -1.48
SCN1A-211ENST00000635893 GZF1Q9H116 711 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-211ENST00000635893 PDLIM7Q9NR12 457 aa5.8□□□□□ -1.48
SCN1A-211ENST00000635893 FFAR3O14843 346 aa5.79□□□□□ -1.48
SCN1A-211ENST00000635893 LIMS1P48059 325 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms