RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 RBM27Q9P2N5 1060 aaKnown RBP17.06■□□□□ 0.32
LIMS4-203ENST00000632758 ADAMTS5Q9UNA0 930 aa17.06■□□□□ 0.32
LIMS4-203ENST00000632758 KCNJ14Q9UNX9 436 aa17.06■□□□□ 0.32
LIMS4-203ENST00000632758 RASSF10A6NK89 507 aa17.06■□□□□ 0.32
LIMS4-203ENST00000632758 PDHXO00330 501 aa17.06■□□□□ 0.32
LIMS4-203ENST00000632758 VWA5AO00534 786 aa17.06■□□□□ 0.32
LIMS4-203ENST00000632758 PEX10O60683 326 aa17.06■□□□□ 0.32
LIMS4-203ENST00000632758 SLC38A10Q9HBR0 1119 aa17.06■□□□□ 0.32
LIMS4-203ENST00000632758 KIF3AQ9Y496 699 aa17.06■□□□□ 0.32
LIMS4-203ENST00000632758 PTPRFP10586 1907 aa17.06■□□□□ 0.32
LIMS4-203ENST00000632758 ZNF536O15090 1300 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 MANSC4A6NHS7 340 aaPredicted RBP17.05■□□□□ 0.32
LIMS4-203ENST00000632758 STXBP3O00186 592 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 STX6O43752 255 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 CYP2C8P10632 490 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 OSBPP22059 807 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 IRX3P78415 501 aaPredicted RBP17.05■□□□□ 0.32
LIMS4-203ENST00000632758 FOXD4L5Q5VV16 416 aaPredicted RBP17.05■□□□□ 0.32
LIMS4-203ENST00000632758 KRT40Q6A162 431 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 ANKRD23Q86SG2 305 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 FBXO11Q86XK2 927 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 CPXCR1Q8N123 301 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 REPS2Q8NFH8 660 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 FBXO18Q8NFZ0 1043 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 FOXD4L4Q8WXT5 416 aaPredicted RBP17.05■□□□□ 0.32
LIMS4-203ENST00000632758 AGBL1Q96MI9 1066 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 RAVER2Q9HCJ3 691 aaKnown RBP17.05■□□□□ 0.32
LIMS4-203ENST00000632758 BARHL2Q9NY43 387 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 ZDHHC9Q9Y397 364 aa17.05■□□□□ 0.32
LIMS4-203ENST00000632758 VPS37CA5D8V6 355 aaPredicted RBP17.04■□□□□ 0.32
LIMS4-203ENST00000632758 ADAMTS3O15072 1205 aa17.04■□□□□ 0.32
LIMS4-203ENST00000632758 AOC2O75106 756 aa17.04■□□□□ 0.32
LIMS4-203ENST00000632758 ZBED4O75132 1171 aa17.04■□□□□ 0.32
LIMS4-203ENST00000632758 PDCP20941 246 aa17.04■□□□□ 0.32
LIMS4-203ENST00000632758 KIF23Q02241 960 aaPredicted RBP17.04■□□□□ 0.32
LIMS4-203ENST00000632758 PABPC4Q13310 644 aaKnown RBP eCLIP17.04■□□□□ 0.32
LIMS4-203ENST00000632758 USH1GQ495M9 461 aa17.04■□□□□ 0.32
LIMS4-203ENST00000632758 MTMR6Q9Y217 621 aa17.04■□□□□ 0.32
LIMS4-203ENST00000632758 PCDHA1Q9Y5I3 950 aa17.04■□□□□ 0.32
LIMS4-203ENST00000632758 H3BQV1 296 aa17.03■□□□□ 0.32
LIMS4-203ENST00000632758 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
LIMS4-203ENST00000632758 HERVK_113P62684 666 aa17.03■□□□□ 0.32
LIMS4-203ENST00000632758 TMEM132BQ14DG7 1078 aa17.03■□□□□ 0.32
LIMS4-203ENST00000632758 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
LIMS4-203ENST00000632758 CAPNS2Q96L46 248 aa17.03■□□□□ 0.32
LIMS4-203ENST00000632758 AMNQ9BXJ7 453 aa17.03■□□□□ 0.32
LIMS4-203ENST00000632758 LOC285556D6RIA3 1793 aa17.03■□□□□ 0.32
LIMS4-203ENST00000632758 MYPNQ86TC9 1320 aa17.03■□□□□ 0.32
LIMS4-203ENST00000632758 NAPAP54920 295 aa17.02■□□□□ 0.32
LIMS4-203ENST00000632758 TRIM29Q14134 588 aa17.02■□□□□ 0.32
LIMS4-203ENST00000632758 LBX2Q6XYB7 198 aa17.02■□□□□ 0.32
LIMS4-203ENST00000632758 PHF20Q9BVI0 1012 aa17.02■□□□□ 0.32
LIMS4-203ENST00000632758 BTBD7Q9P203 1132 aa17.02■□□□□ 0.32
LIMS4-203ENST00000632758 CTDP1Q9Y5B0 961 aaPredicted RBP17.02■□□□□ 0.32
LIMS4-203ENST00000632758 CNMDO75829 334 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 BRD1O95696 1058 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 ICAM1P05362 532 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 FDX1P10109 184 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 NLRP5P59047 1200 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 NPY5RQ15761 445 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 SH3GLB2Q9NR46 395 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 CHMP5Q9NZZ3 219 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 RBPJLQ9UBG7 517 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 CCPG1Q9ULG6 757 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 SLC45A1Q9Y2W3 748 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 RIPK3Q9Y572 518 aa17.02■□□□□ 0.31
LIMS4-203ENST00000632758 SMCO2A6NFE2 343 aa17.01■□□□□ 0.31
LIMS4-203ENST00000632758 MMP1P03956 469 aa17.01■□□□□ 0.31
LIMS4-203ENST00000632758 XBP1P17861 261 aa17.01■□□□□ 0.31
LIMS4-203ENST00000632758 INHBEP58166 350 aa17.01■□□□□ 0.31
LIMS4-203ENST00000632758 FERMT3Q86UX7 667 aa17.01■□□□□ 0.31
LIMS4-203ENST00000632758 IFNL1Q8IU54 200 aa17.01■□□□□ 0.31
LIMS4-203ENST00000632758 OXER1Q8TDS5 423 aa17.01■□□□□ 0.31
LIMS4-203ENST00000632758 PAGR1Q9BTK6 254 aa17.01■□□□□ 0.31
LIMS4-203ENST00000632758 TXNRD2Q9NNW7 524 aa17.01■□□□□ 0.31
LIMS4-203ENST00000632758 ZNF214Q9UL59 606 aaPredicted RBP17.01■□□□□ 0.31
LIMS4-203ENST00000632758 CIZ1Q9ULV3 898 aaPredicted RBP17.01■□□□□ 0.31
LIMS4-203ENST00000632758 RLFQ13129 1914 aa17.01■□□□□ 0.31
LIMS4-203ENST00000632758 hCG_1984214I3L0E3 225 aa17■□□□□ 0.31
LIMS4-203ENST00000632758 TM4SF4P48230 202 aa17■□□□□ 0.31
LIMS4-203ENST00000632758 Q3C1V9 767 aa17■□□□□ 0.31
LIMS4-203ENST00000632758 ZNF713Q8N859 430 aaPredicted RBP17■□□□□ 0.31
LIMS4-203ENST00000632758 PNMA3Q9UL41 463 aa17■□□□□ 0.31
LIMS4-203ENST00000632758 BTBD18B2RXH4 712 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 KIF28PB7ZC32 967 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 OPLAHO14841 1288 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 ZSCAN22P10073 491 aaPredicted RBP16.99■□□□□ 0.31
LIMS4-203ENST00000632758 ALAS1P13196 640 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 STAT3P40763 770 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 VEGFBP49765 207 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 NUCB2P80303 420 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 NOGQ13253 232 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 PLS1Q14651 629 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 MCTP1Q6DN14 999 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 SNRNP48Q6IEG0 339 aaKnown RBP16.99■□□□□ 0.31
LIMS4-203ENST00000632758 DIS3L2Q8IYB7 885 aaKnown RBP16.99■□□□□ 0.31
LIMS4-203ENST00000632758 TBC1D5Q92609 795 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 ZMYND12Q9H0C1 365 aa16.99■□□□□ 0.31
LIMS4-203ENST00000632758 ATP2A1O14983 1001 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 OAZ1P54368 228 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms