RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 NAT16Q8N8M0 369 aa3.9□□□□□ -1.79
SCARNA4-201ENST00000629045 SLC43A3Q8NBI5 491 aa3.9□□□□□ -1.79
SCARNA4-201ENST00000629045 PPP1R14AQ96A00 147 aa3.9□□□□□ -1.79
SCARNA4-201ENST00000629045 DIRC2Q96SL1 478 aa3.9□□□□□ -1.79
SCARNA4-201ENST00000629045 PLCD4Q9BRC7 762 aa3.9□□□□□ -1.79
SCARNA4-201ENST00000629045 SF3B6Q9Y3B4 125 aaKnown RBP3.9□□□□□ -1.79
SCARNA4-201ENST00000629045 ANKRD34BA5PLL1 514 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 FADS2P1A8MWK0 482 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 VAMP4O75379 141 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 PPM1BO75688 479 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 DDAH1O94760 285 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 RTP1P59025 263 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 NCAPHQ15003 741 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 NR0B2Q15466 257 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 SLC14A2Q15849 920 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 HSF5Q4G112 596 aaPredicted RBP3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 TMEM52Q8NDY8 209 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 SHISA4Q96DD7 197 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 FCRL3Q96P31 734 aaPredicted RBP3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 JMJD8Q96S16 334 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 GMLQ99445 158 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 NSUN3Q9H649 340 aaKnown RBP3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 ST7Q9NRC1 585 aa3.89□□□□□ -1.79
SCARNA4-201ENST00000629045 FGF10O15520 208 aaPredicted RBP3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 TBX1O43435 398 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 SUSD5O60279 629 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 KCNH1O95259 989 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 GJB6O95452 261 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 KIR2DL1P43626 348 aaPredicted RBP3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 KIR2DL2P43627 348 aaPredicted RBP3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 POU4F1Q01851 419 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 SLCO6A1Q86UG4 719 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 NLRX1Q86UT6 975 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 SPPL2CQ8IUH8 684 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 LILRA2Q8N149 483 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 ARHGEF39Q8N4T4 335 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 INTS4Q96HW7 963 aaKnown RBP3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 TANGO6Q9C0B7 1094 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 IMPACTQ9P2X3 320 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 TNFRSF10DQ9UBN6 386 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 DIS3Q9Y2L1 958 aaKnown RBP3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 YBX2Q9Y2T7 364 aaKnown RBP3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 TAF6LQ9Y6J9 622 aa3.88□□□□□ -1.79
SCARNA4-201ENST00000629045 A0A087WZG4 1122 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 NRDCO43847 1150 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 MSL3P1P0C860 447 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 PDE6BP35913 854 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 AMPD2Q01433 879 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 GRB10Q13322 594 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 FXNQ16595 210 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 DDR2Q16832 855 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 ADGRF1Q5T601 910 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 ZNF227Q86WZ6 799 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 NUP43Q8NFH3 380 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 BTN2A2Q8WVV5 523 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 RCC1LQ96I51 464 aaKnown RBP3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 PTCHD1Q96NR3 888 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 AKT3Q9Y243 479 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 EMC9Q9Y3B6 208 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 R3HCC1Q9Y3T6 440 aaKnown RBP3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 BACE2Q9Y5Z0 518 aa3.87□□□□□ -1.79
SCARNA4-201ENST00000629045 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 AURKAO14965 403 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 KLF4O43474 513 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 ITGAVP06756 1048 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 C8AP07357 584 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 PRKCAP17252 672 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 ENDOUP21128 410 aaKnown RBP3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 TACR1P25103 407 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 MESP2Q0VG99 397 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 SCRN1Q12765 414 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 LAPTM5Q13571 262 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 ZNF124Q15973 351 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 SLC10A6Q3KNW5 377 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 SV2CQ496J9 727 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 GTF2IRD2BQ6EKJ0 949 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 CYP2R1Q6VVX0 501 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 ZNF605Q86T29 641 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 GTF2IRD2Q86UP8 949 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 JAMLQ86YT9 394 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 POU5F2Q8N7G0 328 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 BVESQ8NE79 360 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 C8orf37Q96NL8 207 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 APBA2Q99767 749 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 SLC6A17Q9H1V8 727 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 EPB41L4BQ9H329 900 aa3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 CWC22Q9HCG8 908 aaKnown RBP3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 DCP1AQ9NPI6 582 aaPredicted RBP3.86□□□□□ -1.79
SCARNA4-201ENST00000629045 A0A1W2PQ45 241 aaPredicted RBP3.85□□□□□ -1.79
SCARNA4-201ENST00000629045 A0A1W2PQY0 241 aa3.85□□□□□ -1.79
SCARNA4-201ENST00000629045 C2orf71A6NGG8 1288 aa3.85□□□□□ -1.79
SCARNA4-201ENST00000629045 WTIPA6NIX2 430 aaPredicted RBP3.85□□□□□ -1.79
SCARNA4-201ENST00000629045 CCDC85CA6NKD9 419 aa3.85□□□□□ -1.79
SCARNA4-201ENST00000629045 NOP56O00567 594 aaKnown RBP3.85□□□□□ -1.79
SCARNA4-201ENST00000629045 STK10O94804 968 aaKnown RBP3.85□□□□□ -1.79
SCARNA4-201ENST00000629045 FARP2O94887 1054 aaPredicted RBP3.85□□□□□ -1.79
SCARNA4-201ENST00000629045 NAT2P11245 290 aa3.85□□□□□ -1.79
SCARNA4-201ENST00000629045 GTF2F1P35269 517 aaKnown RBP eCLIP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms