RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 ACCSLQ4AC99 568 aa13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 FAM117BQ6P1L5 589 aa13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 DHX32Q7L7V1 743 aaKnown RBP13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 DDX53Q86TM3 631 aaKnown RBP13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 CCDC13Q8IYE1 715 aa13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 FRMPD2Q68DX3 1309 aaPredicted RBP13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 BAG2O95816 211 aa13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 PRKCQQ04759 706 aa13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 PAK1Q13153 545 aa13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 SAMSN1Q9NSI8 373 aaKnown RBP13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 POLKQ9UBT6 870 aa13.27□□□□□ -0.28
SLC6A6-210ENST00000622186 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 A0A1B0GUL7 405 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 SIX5Q8N196 739 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 GRK7Q8WTQ7 553 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 CNKSR1Q969H4 720 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 PPP2R3CQ969Q6 453 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 RPGRIP1Q96KN7 1286 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 DENND2CQ68D51 928 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 KSR1Q8IVT5 923 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 INO80B-WBP1J3KQ70 363 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 ZMYND10O75800 440 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 ABCB4P21439 1286 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 STX2P32856 288 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 PDE1BQ01064 536 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 MAP7D3Q8IWC1 876 aa13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 INO80BQ9C086 356 aaPredicted RBP13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 ZNF215Q9UL58 517 aaPredicted RBP13.27□□□□□ -0.29
SLC6A6-210ENST00000622186 CTDSPL2Q05D32 466 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 RPS6KA1Q15418 735 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 CERKLQ49MI3 558 aaPredicted RBP13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 DSTYKQ6XUX3 929 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 ADAT2Q7Z6V5 191 aaKnown RBP13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 FBXL13Q8NEE6 735 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 MFSD1Q9H3U5 465 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 F13A1P00488 732 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 ACTN1P12814 892 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 TRAPPC10P48553 1259 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 POLA2Q14181 598 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 SYT10Q6XYQ8 523 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 BFSP1Q12934 665 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 ZC3H12BQ5HYM0 836 aaKnown RBP13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 GPBP1Q86WP2 473 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 RNF10Q8N5U6 811 aaKnown RBP13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 NUP58Q9BVL2 599 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 EFCAB14O75071 495 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 VPS41P49754 854 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 ATP1A2P50993 1020 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 GOLGA8FQ08AF8 430 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 GOLGA8DPQ0D2H9 430 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 TTC31Q49AM3 519 aaPredicted RBP13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 HDXQ7Z353 690 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 SH3KBP1Q96B97 665 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 NDUFB5O43674 189 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 DCAF4L1Q3SXM0 396 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 ODR4Q5SWX8 454 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 C7orf31Q8N865 590 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 PSMB7Q99436 277 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 MEIS3Q99687 375 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 NT5C3AQ9H0P0 336 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 CPSF2Q9P2I0 782 aaKnown RBP13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 SYNRGQ9UMZ2 1314 aa13.26□□□□□ -0.29
SLC6A6-210ENST00000622186 APOEP02649 317 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 TUBB4AP04350 444 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 KCNJ6P48051 423 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 LINS1Q8NG48 757 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 NAPGQ99747 312 aaPredicted RBP13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 LSM14BQ9BX40 385 aaKnown RBP13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 HELLSQ9NRZ9 838 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 KDM3AQ9Y4C1 1321 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 SDSP20132 328 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 PMLP29590 882 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 IREB2P48200 963 aaKnown RBP13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 NUDT18Q6ZVK8 323 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 DNAAF3Q8N9W5 541 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 LRRC4Q9HBW1 653 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 RAP1GDS1P52306 607 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 YWHAGP61981 247 aaKnown RBP eCLIP13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 FAM47AQ5JRC9 791 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 SIX6OS1Q8N1H7 587 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 AMFRQ9UKV5 643 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 CDV3Q9UKY7 258 aaKnown RBP13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 TFAP4Q01664 338 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 LONRF3Q496Y0 759 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 SMAP1Q8IYB5 467 aaPredicted RBP13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 REXO1Q8N1G1 1221 aaKnown RBP13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 KCTD17Q8N5Z5 321 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 OPHN1O60890 802 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 ZSCAN23Q3MJ62 389 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 CREB3L3Q68CJ9 461 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 RUFY4Q6ZNE9 571 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 AFAP1L1Q8TED9 768 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 TMEM87BQ96K49 555 aa13.25□□□□□ -0.29
SLC6A6-210ENST00000622186 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms