RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 BTBD7Q9P203 1132 aa19.06■□□□□ 0.64
SPTSSB-204ENST00000617024 A0A0C4DFX4 3053 aa19.06■□□□□ 0.64
SPTSSB-204ENST00000617024 GOLGA8AA7E2F4 631 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 GOLGA8BA8MQT2 603 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 DHX16O60231 1041 aaKnown RBP19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 CNMDO75829 334 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 PDIA3P30101 505 aaKnown RBP19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 METAP2P50579 478 aaKnown RBP eCLIP19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 ERVK-9P63128 1117 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 ERVK-24P63145 666 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 PLS1Q14651 629 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 TMEM132BQ14DG7 1078 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 RTN1Q16799 776 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 ADGRF4Q8IZF3 695 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 CPVLQ9H3G5 476 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 RLFQ13129 1914 aa19.05■□□□□ 0.64
SPTSSB-204ENST00000617024 CCDC196A0A1B0GTZ2 297 aa19.04■□□□□ 0.64
SPTSSB-204ENST00000617024 PEX10O60683 326 aa19.04■□□□□ 0.64
SPTSSB-204ENST00000617024 SMARCA1P28370 1054 aa19.04■□□□□ 0.64
SPTSSB-204ENST00000617024 SNAP25P60880 206 aa19.04■□□□□ 0.64
SPTSSB-204ENST00000617024 CCNA1P78396 465 aa19.04■□□□□ 0.64
SPTSSB-204ENST00000617024 KIF22Q14807 665 aa19.04■□□□□ 0.64
SPTSSB-204ENST00000617024 CCAR1Q8IX12 1150 aaKnown RBP19.04■□□□□ 0.64
SPTSSB-204ENST00000617024 PTCH2Q9Y6C5 1203 aa19.04■□□□□ 0.64
SPTSSB-204ENST00000617024 ST18O60284 1047 aa19.03■□□□□ 0.64
SPTSSB-204ENST00000617024 STAT3P40763 770 aa19.03■□□□□ 0.64
SPTSSB-204ENST00000617024 CPXCR1Q8N123 301 aa19.03■□□□□ 0.64
SPTSSB-204ENST00000617024 REPS2Q8NFH8 660 aa19.03■□□□□ 0.64
SPTSSB-204ENST00000617024 SPATC1LQ9H0A9 340 aa19.03■□□□□ 0.64
SPTSSB-204ENST00000617024 RANBP17Q9H2T7 1088 aaKnown RBP19.03■□□□□ 0.64
SPTSSB-204ENST00000617024 RIOX1Q9H6W3 641 aa19.03■□□□□ 0.64
SPTSSB-204ENST00000617024 JMJD4Q9H9V9 463 aa19.03■□□□□ 0.64
SPTSSB-204ENST00000617024 TPCN1Q9ULQ1 816 aa19.03■□□□□ 0.64
SPTSSB-204ENST00000617024 RBM19Q9Y4C8 960 aaKnown RBP19.03■□□□□ 0.64
SPTSSB-204ENST00000617024 PARP14Q460N5 1801 aa19.02■□□□□ 0.64
SPTSSB-204ENST00000617024 ATP2A1O14983 1001 aa19.02■□□□□ 0.64
SPTSSB-204ENST00000617024 OAZ1P54368 228 aa19.02■□□□□ 0.64
SPTSSB-204ENST00000617024 CCDC174Q6PII3 467 aa19.02■□□□□ 0.64
SPTSSB-204ENST00000617024 NOL8Q76FK4 1167 aaKnown RBP19.02■□□□□ 0.64
SPTSSB-204ENST00000617024 NBPF11Q86T75 865 aa19.02■□□□□ 0.64
SPTSSB-204ENST00000617024 SRBD1Q8N5C6 995 aaKnown RBP19.02■□□□□ 0.64
SPTSSB-204ENST00000617024 RAVER2Q9HCJ3 691 aaKnown RBP19.02■□□□□ 0.64
SPTSSB-204ENST00000617024 LAMA3Q16787 3333 aa19.02■□□□□ 0.63
SPTSSB-204ENST00000617024 PLEKHA8P1O95397 391 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 SLC25A27O95847 323 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 CDC27P30260 824 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 ADD1P35611 737 aaKnown RBP19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 SLC4A3P48751 1232 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 CCT2P78371 535 aaKnown RBP19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 LACTBP83111 547 aaPredicted RBP19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 STK3Q13188 491 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 ARHGEF6Q15052 776 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 SNRNP48Q6IEG0 339 aaKnown RBP19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 TMTC3Q6ZXV5 915 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 RIOX2Q8IUF8 465 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 CMTR1Q8N1G2 835 aaKnown RBP19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 CCDC82Q8N4S0 544 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 TMEM106CQ9BVX2 250 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 SPZ1Q9BXG8 430 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 MOV10L1Q9BXT6 1211 aaKnown RBP19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 TEX13BQ9BXU2 312 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 SLKQ9H2G2 1235 aaPredicted RBP19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 FAM217BQ9NTX9 383 aaPredicted RBP19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 PNMA2Q9UL42 364 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 ZNF214Q9UL59 606 aaPredicted RBP19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 LIMCH1Q9UPQ0 1083 aa19.01■□□□□ 0.63
SPTSSB-204ENST00000617024 H0YGN5 161 aa19■□□□□ 0.63
SPTSSB-204ENST00000617024 CYTH3O43739 400 aa19■□□□□ 0.63
SPTSSB-204ENST00000617024 MAPK4P31152 587 aa19■□□□□ 0.63
SPTSSB-204ENST00000617024 CDC37Q16543 378 aaPredicted RBP19■□□□□ 0.63
SPTSSB-204ENST00000617024 SHCBP1Q8NEM2 672 aa19■□□□□ 0.63
SPTSSB-204ENST00000617024 MTMR8Q96EF0 704 aa19■□□□□ 0.63
SPTSSB-204ENST00000617024 RRP36Q96EU6 259 aaKnown RBP19■□□□□ 0.63
SPTSSB-204ENST00000617024 AGBL1Q96MI9 1066 aa19■□□□□ 0.63
SPTSSB-204ENST00000617024 CWC22Q9HCG8 908 aaKnown RBP19■□□□□ 0.63
SPTSSB-204ENST00000617024 ZBTB5O15062 677 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 PFKFB2O60825 505 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 ECM2O94769 699 aaPredicted RBP18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 FMNL1O95466 1100 aaPredicted RBP18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 ICAM1P05362 532 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 COPB2P35606 906 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 PSMC4P43686 418 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 FCGRTP55899 365 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 SLC35G1Q2M3R5 365 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 SLC9C1Q4G0N8 1177 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 NCAPG2Q86XI2 1143 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 ZSCAN31Q96LW9 406 aaPredicted RBP18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 PIGSQ96S52 555 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 PORCNQ9H237 461 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 MROH8Q9H579 483 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 NCOA5Q9HCD5 579 aaKnown RBP18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 CCPG1Q9ULG6 757 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 ZNF536O15090 1300 aa18.99■□□□□ 0.63
SPTSSB-204ENST00000617024 COL11A1P12107 1806 aaPredicted RBP18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 NID2Q14112 1375 aa18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 PNMA6FA0A0J9YX94 578 aa18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 MYCP01106 439 aaPredicted RBP18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 ERCC3P19447 782 aa18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 ME3Q16798 604 aa18.98■□□□□ 0.63
SPTSSB-204ENST00000617024 QRICH1Q2TAL8 776 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms