RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 TNRC18O15417 2968 aaPredicted RBP9.33□□□□□ -0.92
PCDH9-205ENST00000614931 POTEFA5A3E0 1075 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 TAL1P17542 331 aaPredicted RBP9.32□□□□□ -0.92
PCDH9-205ENST00000614931 OSBPP22059 807 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 HOXD10P28358 340 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 KIF5BP33176 963 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 HMGCS2P54868 508 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 FCGRTP55899 365 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 BACE1P56817 501 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 SLC9C1Q4G0N8 1177 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 PIBF1Q8WXW3 757 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 FEZ1Q99689 392 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 SPZ1Q9BXG8 430 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 GOPCQ9HD26 462 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 FBXO28Q9NVF7 368 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 PNMA3Q9UL41 463 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 ZDHHC9Q9Y397 364 aa9.32□□□□□ -0.92
PCDH9-205ENST00000614931 LCTP09848 1927 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 CCDC196A0A1B0GTZ2 297 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 C19orf81C9J6K1 198 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 USP17L10C9JJH3 530 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 TMEM232C9JQI7 657 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 ADAMTS3O15072 1205 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 PRPF3O43395 683 aaKnown RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 PPP1R11O60927 126 aaPredicted RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 ECM2O94769 699 aaPredicted RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 BMP3P12645 472 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 VCAM1P19320 739 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 SYT1P21579 422 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 HOXA7P31268 230 aaPredicted RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 SLC1A4P43007 532 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 SNAP25P60880 206 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 HMGN5P82970 282 aaKnown RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 GUCY1B3Q02153 619 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 SSRP1Q08945 709 aaKnown RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 PABPC4Q13310 644 aaKnown RBP eCLIP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 PPP2R5BQ15173 497 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 GPATCH4Q5T3I0 446 aaKnown RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 BTNL9Q6UXG8 535 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 SMCR8Q8TEV9 937 aaPredicted RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 MTMR8Q96EF0 704 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 C12orf42Q96LP6 360 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 PIGSQ96S52 555 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 RNF26Q9BY78 433 aaPredicted RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 RIOX1Q9H6W3 641 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 SH2D4AQ9H788 454 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 JMJD4Q9H9V9 463 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 CWC22Q9HCG8 908 aaKnown RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 ISY1Q9ULR0 285 aaKnown RBP9.31□□□□□ -0.92
PCDH9-205ENST00000614931 MYPNQ86TC9 1320 aa9.31□□□□□ -0.92
PCDH9-205ENST00000614931 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
PCDH9-205ENST00000614931 DHX16O60231 1041 aaKnown RBP9.3□□□□□ -0.92
PCDH9-205ENST00000614931 CDKL5O76039 1030 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 GCLCP48506 637 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-205ENST00000614931 GNAQP50148 359 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 USP14P54578 494 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 PRKCZQ05513 592 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 FAM110CQ1W6H9 321 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 SYDE2Q5VT97 1194 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 TYW1BQ6NUM6 668 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 CPLX2Q6PUV4 134 aaKnown RBP9.3□□□□□ -0.92
PCDH9-205ENST00000614931 ADGRF4Q8IZF3 695 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 ANKRD13CQ8N6S4 541 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 SH3TC2Q8TF17 1288 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 GPKOWQ92917 476 aaPredicted RBP eCLIP9.3□□□□□ -0.92
PCDH9-205ENST00000614931 ALG1Q9BT22 464 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 ASCC2Q9H1I8 757 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-205ENST00000614931 RPAP3Q9H6T3 665 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-205ENST00000614931 TMOD4Q9NZQ9 345 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 GABRQQ9UN88 632 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 MTMR6Q9Y217 621 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 V9GY48 417 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-205ENST00000614931 MYH7BA7E2Y1 1941 aa9.3□□□□□ -0.92
PCDH9-205ENST00000614931 STXBP3O00186 592 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 STX6O43752 255 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 DEXIO95424 95 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 BRD1O95696 1058 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 EN2P19622 333 aaPredicted RBP9.29□□□□□ -0.92
PCDH9-205ENST00000614931 SMARCA1P28370 1054 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 GRK4P32298 578 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 IRF5Q13568 498 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 NPY5RQ15761 445 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 QRICH1Q2TAL8 776 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 FOXD4L5Q5VV16 416 aaPredicted RBP9.29□□□□□ -0.92
PCDH9-205ENST00000614931 WWC2Q6AWC2 1192 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 POTEEQ6S8J3 1075 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 HOMER1Q86YM7 354 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 TRIM22Q8IYM9 498 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 FAM184AQ8NB25 1140 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 RAET1EQ8TD07 263 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 FOXD4L4Q8WXT5 416 aaPredicted RBP9.29□□□□□ -0.92
PCDH9-205ENST00000614931 LPAR1Q92633 364 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 CHAMP1Q96JM3 812 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 LZTS2Q9BRK4 669 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 TMEM106CQ9BVX2 250 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 VAT1LQ9HCJ6 419 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 CHMP5Q9NZZ3 219 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 MORF4L1Q9UBU8 362 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 PRR12Q9ULL5 1215 aa9.29□□□□□ -0.92
PCDH9-205ENST00000614931 CIZ1Q9ULV3 898 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms