RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 A0A1W2PQD8 194 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 GSNP06396 782 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 SYN1P17600 705 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 LDHDQ86WU2 507 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 SP8Q8IXZ3 490 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 CCDC144CPQ8IYA2 1237 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 NAT16Q8N8M0 369 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 SLC9A7Q96T83 725 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 NT5C1AQ9BXI3 368 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 GZF1Q9H116 711 aaPredicted RBP5.83□□□□□ -1.48
VPS4B-203ENST00000588323 XYLT2Q9H1B5 865 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 EPB41L4AQ9HCS5 686 aaPredicted RBP5.83□□□□□ -1.48
VPS4B-203ENST00000588323 AP5S1Q9NUS5 200 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 ACSL6Q9UKU0 697 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 FAM86C2PA6NEL3 165 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 OTOL1A6NHN0 477 aaPredicted RBP5.82□□□□□ -1.48
VPS4B-203ENST00000588323 VMACQ2NL98 169 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 FAM129CQ86XR2 697 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 KIAA0825Q8IV33 1275 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 IGDCC3Q8IVU1 814 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 SLITRK4Q8IW52 837 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 TMEFF1Q8IYR6 380 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 C7orf61Q8IZ16 206 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 GIPC2Q8TF65 315 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 EAF1Q96JC9 268 aaPredicted RBP5.82□□□□□ -1.48
VPS4B-203ENST00000588323 JMJD8Q96S16 334 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 TNFRSF12AQ9NP84 129 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 IMPACTQ9P2X3 320 aa5.82□□□□□ -1.48
VPS4B-203ENST00000588323 SUCOQ9UBS9 1254 aaKnown RBP5.82□□□□□ -1.48
VPS4B-203ENST00000588323 MRPL58Q14197 206 aaKnown RBP5.81□□□□□ -1.48
VPS4B-203ENST00000588323 ERICH6BQ5W0A0 696 aa5.81□□□□□ -1.48
VPS4B-203ENST00000588323 CWF19L1Q69YN2 538 aaKnown RBP5.81□□□□□ -1.48
VPS4B-203ENST00000588323 RPTNQ6XPR3 784 aa5.81□□□□□ -1.48
VPS4B-203ENST00000588323 CXorf38Q8TB03 319 aa5.81□□□□□ -1.48
VPS4B-203ENST00000588323 FEZF2Q8TBJ5 459 aa5.81□□□□□ -1.48
VPS4B-203ENST00000588323 PWWP2AQ96N64 755 aa5.81□□□□□ -1.48
VPS4B-203ENST00000588323 SPON2Q9BUD6 331 aa5.81□□□□□ -1.48
VPS4B-203ENST00000588323 PCDHA5Q9Y5H7 936 aa5.81□□□□□ -1.48
VPS4B-203ENST00000588323 BUB1BO60566 1050 aaPredicted RBP5.8□□□□□ -1.48
VPS4B-203ENST00000588323 GSTM1P09488 218 aa5.8□□□□□ -1.48
VPS4B-203ENST00000588323 NCKAP1LP55160 1127 aa5.8□□□□□ -1.48
VPS4B-203ENST00000588323 CBX2Q14781 532 aaPredicted RBP5.8□□□□□ -1.48
VPS4B-203ENST00000588323 NR1I3Q14994 352 aa5.8□□□□□ -1.48
VPS4B-203ENST00000588323 HLA-DQA1Q5Y7H0 255 aa5.8□□□□□ -1.48
VPS4B-203ENST00000588323 INTS3Q68E01 1043 aaKnown RBP5.8□□□□□ -1.48
VPS4B-203ENST00000588323 JAMLQ86YT9 394 aa5.8□□□□□ -1.48
VPS4B-203ENST00000588323 ZDHHC14Q8IZN3 488 aa5.8□□□□□ -1.48
VPS4B-203ENST00000588323 TMEM52Q8NDY8 209 aa5.8□□□□□ -1.48
VPS4B-203ENST00000588323 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
VPS4B-203ENST00000588323 A0A1W2PQJ5 194 aa5.79□□□□□ -1.48
VPS4B-203ENST00000588323 C9IYK1 514 aa5.79□□□□□ -1.48
VPS4B-203ENST00000588323 IMPDH2P12268 514 aa5.79□□□□□ -1.48
VPS4B-203ENST00000588323 CEBPAP49715 358 aaPredicted RBP5.79□□□□□ -1.48
VPS4B-203ENST00000588323 PLEKHN1Q494U1 663 aaPredicted RBP5.79□□□□□ -1.48
VPS4B-203ENST00000588323 RTP2Q5QGT7 225 aa5.79□□□□□ -1.48
VPS4B-203ENST00000588323 NOL9Q5SY16 702 aaKnown RBP5.79□□□□□ -1.48
VPS4B-203ENST00000588323 TDRD10Q5VZ19 366 aaKnown RBP5.79□□□□□ -1.48
VPS4B-203ENST00000588323 ZC3H14Q6PJT7 736 aaKnown RBP5.79□□□□□ -1.48
VPS4B-203ENST00000588323 LINC01356Q8N9X3 169 aa5.79□□□□□ -1.48
VPS4B-203ENST00000588323 SMARCC1Q92922 1105 aaPredicted RBP5.79□□□□□ -1.48
VPS4B-203ENST00000588323 SLC12A9Q9BXP2 914 aa5.79□□□□□ -1.48
VPS4B-203ENST00000588323 ZNRF3Q9ULT6 936 aa5.79□□□□□ -1.48
VPS4B-203ENST00000588323 SHOXO15266 292 aa5.78□□□□□ -1.48
VPS4B-203ENST00000588323 ACRP10323 421 aa5.78□□□□□ -1.48
VPS4B-203ENST00000588323 PFKLP17858 780 aa5.78□□□□□ -1.48
VPS4B-203ENST00000588323 MAPKAPK2P49137 400 aa5.78□□□□□ -1.48
VPS4B-203ENST00000588323 PMS1P54277 932 aaKnown RBP5.78□□□□□ -1.48
VPS4B-203ENST00000588323 ZNF200P98182 395 aaPredicted RBP5.78□□□□□ -1.48
VPS4B-203ENST00000588323 MVKQ03426 396 aa5.78□□□□□ -1.48
VPS4B-203ENST00000588323 CYP2R1Q6VVX0 501 aa5.78□□□□□ -1.48
VPS4B-203ENST00000588323 NLGN1Q8N2Q7 840 aa5.78□□□□□ -1.48
VPS4B-203ENST00000588323 SYT8Q8NBV8 401 aa5.78□□□□□ -1.48
VPS4B-203ENST00000588323 LUC7LQ9NQ29 371 aaKnown RBP5.78□□□□□ -1.48
VPS4B-203ENST00000588323 H0Y8X5 98 aa5.77□□□□□ -1.49
VPS4B-203ENST00000588323 CELA3BP08861 270 aa5.77□□□□□ -1.49
VPS4B-203ENST00000588323 MSL3P1P0C860 447 aa5.77□□□□□ -1.49
VPS4B-203ENST00000588323 NOP2P46087 812 aaKnown RBP5.77□□□□□ -1.49
VPS4B-203ENST00000588323 TARBP2Q15633 366 aaKnown RBP5.77□□□□□ -1.49
VPS4B-203ENST00000588323 TAB3Q8N5C8 712 aaPredicted RBP5.77□□□□□ -1.49
VPS4B-203ENST00000588323 TMEM87AQ8NBN3 555 aa5.77□□□□□ -1.49
VPS4B-203ENST00000588323 FERD3LQ96RJ6 166 aa5.77□□□□□ -1.49
VPS4B-203ENST00000588323 ZC3H12DA2A288 527 aaKnown RBP5.76□□□□□ -1.49
VPS4B-203ENST00000588323 LIMS1P48059 325 aa5.76□□□□□ -1.49
VPS4B-203ENST00000588323 ANKRD39Q53RE8 183 aa5.76□□□□□ -1.49
VPS4B-203ENST00000588323 FBXW10Q5XX13 1052 aa5.76□□□□□ -1.49
VPS4B-203ENST00000588323 DCAF15Q66K64 600 aa5.76□□□□□ -1.49
VPS4B-203ENST00000588323 BICRALQ6AI39 1079 aa5.76□□□□□ -1.49
VPS4B-203ENST00000588323 RGS22Q8NE09 1264 aa5.76□□□□□ -1.49
VPS4B-203ENST00000588323 BRF1Q92994 677 aa5.76□□□□□ -1.49
VPS4B-203ENST00000588323 TEPSINQ96N21 525 aa5.76□□□□□ -1.49
VPS4B-203ENST00000588323 TM9SF2Q99805 663 aa5.76□□□□□ -1.49
VPS4B-203ENST00000588323 GP6Q9HCN6 339 aa5.76□□□□□ -1.49
VPS4B-203ENST00000588323 IRS2Q9Y4H2 1338 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 SRGAP3O43295 1099 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 TP53P04637 393 aaPredicted RBP5.75□□□□□ -1.49
VPS4B-203ENST00000588323 CYBBP04839 570 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 DBHP09172 617 aa5.75□□□□□ -1.49
VPS4B-203ENST00000588323 IGFBP6P24592 240 aaPredicted RBP5.75□□□□□ -1.49
VPS4B-203ENST00000588323 ZNF76P36508 570 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms