RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 A0A1W2PQ64 194 aa16.02■□□□□ 0.15
UBBP4-202ENST00000584755 A0A1W2PQD8 194 aa16.02■□□□□ 0.15
UBBP4-202ENST00000584755 GOLGA6L4A6NEF3 574 aa16.02■□□□□ 0.15
UBBP4-202ENST00000584755 TRIM75PA6NK02 468 aa16.02■□□□□ 0.15
UBBP4-202ENST00000584755 PPP1R12BO60237 982 aaPredicted RBP16.02■□□□□ 0.15
UBBP4-202ENST00000584755 BACE1P56817 501 aa16.02■□□□□ 0.15
UBBP4-202ENST00000584755 ZYXQ15942 572 aaKnown RBP16.02■□□□□ 0.15
UBBP4-202ENST00000584755 MAP3K11Q16584 847 aa16.02■□□□□ 0.15
UBBP4-202ENST00000584755 AXDND1Q5T1B0 1012 aaPredicted RBP16.02■□□□□ 0.15
UBBP4-202ENST00000584755 CAVIN1Q6NZI2 390 aaKnown RBP16.02■□□□□ 0.15
UBBP4-202ENST00000584755 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.02■□□□□ 0.15
UBBP4-202ENST00000584755 PIK3AP1Q6ZUJ8 805 aa16.02■□□□□ 0.15
UBBP4-202ENST00000584755 RANBP17Q9H2T7 1088 aaKnown RBP16.02■□□□□ 0.15
UBBP4-202ENST00000584755 EMILIN3Q9NT22 766 aa16.02■□□□□ 0.15
UBBP4-202ENST00000584755 TMEM63CQ9P1W3 806 aa16.02■□□□□ 0.15
UBBP4-202ENST00000584755 PCDHB6Q9Y5E3 794 aa16.02■□□□□ 0.15
UBBP4-202ENST00000584755 BMP15O95972 392 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 ME1P48163 572 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 CLK2P49760 499 aaKnown RBP16.01■□□□□ 0.15
UBBP4-202ENST00000584755 ADCY7P51828 1080 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 SPP2Q13103 211 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 IKQ13123 557 aaPredicted RBP16.01■□□□□ 0.15
UBBP4-202ENST00000584755 MTMR2Q13614 643 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 KRT25Q7Z3Z0 450 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 TEX2Q8IWB9 1127 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 JMYQ8N9B5 988 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 RASGRP4Q8TDF6 673 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 AMNQ9BXJ7 453 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 GLT8D2Q9H1C3 349 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 CEP131Q9UPN4 1083 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 SNCAIPQ9Y6H5 919 aa16.01■□□□□ 0.15
UBBP4-202ENST00000584755 CCDC194A0A1B0GVG4 234 aa16■□□□□ 0.15
UBBP4-202ENST00000584755 C19orf81C9J6K1 198 aa16■□□□□ 0.15
UBBP4-202ENST00000584755 WNT7AO00755 349 aa16■□□□□ 0.15
UBBP4-202ENST00000584755 TRAF1Q13077 416 aa16■□□□□ 0.15
UBBP4-202ENST00000584755 VGLL4Q14135 290 aa16■□□□□ 0.15
UBBP4-202ENST00000584755 TTC38Q5R3I4 469 aa16■□□□□ 0.15
UBBP4-202ENST00000584755 FBXO11Q86XK2 927 aa16■□□□□ 0.15
UBBP4-202ENST00000584755 REXO1Q8N1G1 1221 aaKnown RBP16■□□□□ 0.15
UBBP4-202ENST00000584755 SYAP1Q96A49 352 aaPredicted RBP16■□□□□ 0.15
UBBP4-202ENST00000584755 AFG3L2Q9Y4W6 797 aa16■□□□□ 0.15
UBBP4-202ENST00000584755 PCDHA1Q9Y5I3 950 aa16■□□□□ 0.15
UBBP4-202ENST00000584755 ZHX2Q9Y6X8 837 aa16■□□□□ 0.15
UBBP4-202ENST00000584755 LIG1P18858 919 aa15.99■□□□□ 0.15
UBBP4-202ENST00000584755 VCAM1P19320 739 aa15.99■□□□□ 0.15
UBBP4-202ENST00000584755 NF2P35240 595 aa15.99■□□□□ 0.15
UBBP4-202ENST00000584755 IREB2P48200 963 aaKnown RBP15.99■□□□□ 0.15
UBBP4-202ENST00000584755 MRPL12P52815 198 aaKnown RBP15.99■□□□□ 0.15
UBBP4-202ENST00000584755 EAPPQ56P03 285 aaPredicted RBP15.99■□□□□ 0.15
UBBP4-202ENST00000584755 SH3D19Q5HYK7 790 aa15.99■□□□□ 0.15
UBBP4-202ENST00000584755 CUL5Q93034 780 aa15.99■□□□□ 0.15
UBBP4-202ENST00000584755 GZF1Q9H116 711 aaPredicted RBP15.99■□□□□ 0.15
UBBP4-202ENST00000584755 FAM237AA0A1B0GTK4 181 aa15.98■□□□□ 0.15
UBBP4-202ENST00000584755 PTPREP23469 700 aa15.98■□□□□ 0.15
UBBP4-202ENST00000584755 ZSCAN23Q3MJ62 389 aa15.98■□□□□ 0.15
UBBP4-202ENST00000584755 CCDC183Q5T5S1 534 aa15.98■□□□□ 0.15
UBBP4-202ENST00000584755 CCAR1Q8IX12 1150 aaKnown RBP15.98■□□□□ 0.15
UBBP4-202ENST00000584755 PRPF38AQ8NAV1 312 aaKnown RBP15.98■□□□□ 0.15
UBBP4-202ENST00000584755 SLF1Q9BQI6 1058 aa15.98■□□□□ 0.15
UBBP4-202ENST00000584755 PSTPIP2Q9H939 334 aa15.98■□□□□ 0.15
UBBP4-202ENST00000584755 FBXO28Q9NVF7 368 aa15.98■□□□□ 0.15
UBBP4-202ENST00000584755 FBXO2Q9UK22 296 aaPredicted RBP15.98■□□□□ 0.15
UBBP4-202ENST00000584755 PARP14Q460N5 1801 aa15.98■□□□□ 0.15
UBBP4-202ENST00000584755 CUTAO60888 179 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 CMA1P23946 247 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 MARCKSP29966 332 aaPredicted RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 ZNF445P59923 1031 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 SNAP25P60880 206 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 PRKG1Q13976 671 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 GSE1Q14687 1217 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 NONOQ15233 471 aaKnown RBP eCLIP15.97■□□□□ 0.156e-6■■□□□ 11.8
UBBP4-202ENST00000584755 KRI1Q8N9T8 703 aaKnown RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 ENGASEQ8NFI3 743 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 RBM46Q8TBY0 533 aaKnown RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 MRPS27Q92552 414 aaKnown RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 KIFC2Q96AC6 838 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 GOLPH3LQ9H4A5 285 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 DDX19AQ9NUU7 478 aaKnown RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 BIN2Q9UBW5 565 aaPredicted RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 SRPRBQ9Y5M8 271 aaKnown RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 CSADQ9Y600 493 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 ATP2C1P98194 919 aaPredicted RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 ORC2Q13416 577 aaPredicted RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 SNW1Q13573 536 aaKnown RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 DGKZQ13574 1117 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 INF2Q27J81 1249 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 MCTP2Q6DN12 878 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 ANKRD13AQ8IZ07 590 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 C4orf32Q8N8J7 132 aa15.97■□□□□ 0.15
UBBP4-202ENST00000584755 ZNF579Q8NAF0 562 aaKnown RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 RPAP3Q9H6T3 665 aaPredicted RBP15.97■□□□□ 0.15
UBBP4-202ENST00000584755 PTPRFP10586 1907 aa15.96■□□□□ 0.15
UBBP4-202ENST00000584755 RLFQ13129 1914 aa15.96■□□□□ 0.15
UBBP4-202ENST00000584755 MEIS2O14770 477 aa15.96■□□□□ 0.14
UBBP4-202ENST00000584755 OPLAHO14841 1288 aa15.96■□□□□ 0.14
UBBP4-202ENST00000584755 NR1I2O75469 434 aa15.96■□□□□ 0.14
UBBP4-202ENST00000584755 POTEIP0CG38 1075 aa15.96■□□□□ 0.14
UBBP4-202ENST00000584755 POTEJP0CG39 1038 aa15.96■□□□□ 0.14
UBBP4-202ENST00000584755 FDX1P10109 184 aa15.96■□□□□ 0.14
UBBP4-202ENST00000584755 ATP2B1P20020 1258 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms