RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 GABPB1Q06547 395 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 PPP2R5AQ15172 486 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 RESP18Q5W5W9 173 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 TMCO3Q6UWJ1 677 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 VSTM4Q8IW00 320 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 DHX58Q96C10 678 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 BAG1Q99933 345 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 CABP5Q9NP86 173 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 MAN1B1Q9UKM7 699 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 PARP3Q9Y6F1 533 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 PSDA5PKW4 1024 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 ABL1P00519 1130 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 GPSM2P81274 684 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 PPARAQ07869 468 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 EZH2Q15910 746 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 DPH6Q7L8W6 267 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 NOSTRINQ8IVI9 506 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 MED15Q96RN5 788 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 NACAP1Q9BZK3 213 aa13.04□□□□□ -0.32
CDK5RAP3-231ENST00000584063 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 MMP1P03956 469 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 BMS1Q14692 1282 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 LONRF1Q17RB8 773 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 WWC2Q6AWC2 1192 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 CPLX2Q6PUV4 134 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 DZIP1Q86YF9 867 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 ZNF654Q8IZM8 581 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 EPSTI1Q96J88 318 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 RETREG1Q9H6L5 497 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 MAPK8IP1Q9UQF2 711 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 LY75O60449 1722 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 WDR19Q8NEZ3 1342 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 A0A087X0B3 334 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 CDKL5O76039 1030 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 CYP2D6P10635 497 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 INHBEP58166 350 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 DIXDC1Q155Q3 683 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 C11orf91Q3C1V1 193 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 DEFB132Q7Z7B7 95 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 CCDC12Q8WUD4 166 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 EEF2KMTQ96G04 330 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 MRPL44Q9H9J2 332 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 TUBE1Q9UJT0 475 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 TNKSO95271 1327 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 RREB1Q92766 1687 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 RRM1P23921 792 aa13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 PSMC1P62191 440 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-231ENST00000584063 RBM47A0AV96 593 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 DYTNA2CJ06 578 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 F8W031 263 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 IFNAR1P17181 557 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 CDC25AP30304 524 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 LIFRP42702 1097 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 POSTNQ15063 836 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 FAM47AQ5JRC9 791 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 FBXO33Q7Z6M2 555 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 TMEM139Q8IV31 216 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 PRPF38AQ8NAV1 312 aaKnown RBP13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 HINFPQ9BQA5 517 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 BPIFA3Q9BQP9 254 aa13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 PDGFDQ9GZP0 370 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 FBXO2Q9UK22 296 aaPredicted RBP13.02□□□□□ -0.32
CDK5RAP3-231ENST00000584063 KIF2AO00139 706 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-231ENST00000584063 IKBKBO14920 756 aa13.02□□□□□ -0.33
CDK5RAP3-231ENST00000584063 PPP6R2O75170 966 aa13.02□□□□□ -0.33
CDK5RAP3-231ENST00000584063 CCT6AP40227 531 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-231ENST00000584063 ALX1Q15699 326 aa13.02□□□□□ -0.33
CDK5RAP3-231ENST00000584063 GPIHBP1Q8IV16 184 aa13.02□□□□□ -0.33
CDK5RAP3-231ENST00000584063 FBXO41Q8TF61 875 aa13.02□□□□□ -0.33
CDK5RAP3-231ENST00000584063 PAGR1Q9BTK6 254 aa13.02□□□□□ -0.33
CDK5RAP3-231ENST00000584063 CSRNP2Q9H175 543 aa13.02□□□□□ -0.33
CDK5RAP3-231ENST00000584063 SUGCTQ9HAC7 445 aa13.02□□□□□ -0.33
CDK5RAP3-231ENST00000584063 TADA3O75528 432 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 KCNA2P16389 499 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 SKIDA1Q1XH10 827 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 TC2NQ8N9U0 490 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 FANCBQ8NB91 859 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 CCDC47Q96A33 483 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 BLZF1Q9H2G9 400 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 XDHP47989 1333 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 G3V3G9 751 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 PLSCR1O15162 318 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 TIMM44O43615 452 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 POU5F1Q01860 360 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 GRIK5Q16478 980 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 CDC37Q16543 378 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 LARGE2Q8N3Y3 721 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 ENAHQ8N8S7 591 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 UBAC1Q9BSL1 405 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 RABL2AQ9UBK7 228 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 GGA1Q9UJY5 639 aa13.01□□□□□ -0.33
CDK5RAP3-231ENST00000584063 BCORQ6W2J9 1755 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms