RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 B8ZZF3 427 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 H0Y8X5 98 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 NCANO14594 1321 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 N4BP3O15049 544 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 TRIM13O60858 407 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 MPOP05164 745 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 GSNP06396 782 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 GSTM1P09488 218 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 ENDOUP21128 410 aaKnown RBP7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 PMS1P54277 932 aaKnown RBP7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 CYP4F8P98187 520 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 RAB3GAP1Q15042 981 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 FBXW10Q5XX13 1052 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 INTS3Q68E01 1043 aaKnown RBP7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 RUFY4Q6ZNE9 571 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 TMC6Q7Z403 805 aa7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 EPB41L4AQ9HCS5 686 aaPredicted RBP7.14□□□□□ -1.27
SMCHD1-208ENST00000583344 A0A1W2PQ45 241 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 A0A1W2PQY0 241 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 PRRG2O14669 202 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 TP53P04637 393 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 IMPDH2P12268 514 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 ARL4AP40617 200 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 LAPTM5Q13571 262 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 AXDND1Q5T1B0 1012 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 NAT16Q8N8M0 369 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 BRF1Q92994 677 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 KCNC2Q96PR1 638 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 SLC12A9Q9BXP2 914 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 TNFRSF12AQ9NP84 129 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 ACSL6Q9UKU0 697 aa7.13□□□□□ -1.27
SMCHD1-208ENST00000583344 IRS4O14654 1257 aaPredicted RBP7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 MSL3P1P0C860 447 aa7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 ZNF445P59923 1031 aa7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 RACK1P63244 317 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 TMCO4Q5TGY1 634 aa7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 OLFML2BQ68BL8 750 aa7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 TAB3Q8N5C8 712 aaPredicted RBP7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 MZB1Q8WU39 189 aa7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 DACT3Q96B18 629 aaPredicted RBP7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 TM9SF2Q99805 663 aa7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 KRTAP4-2Q9BYR5 136 aa7.12□□□□□ -1.27
SMCHD1-208ENST00000583344 A0A0G2JLL6 359 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 ABLIM1O14639 778 aa7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 BUD31P41223 144 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 AFF3P51826 1226 aaKnown RBP7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 NCKAP1LP55160 1127 aa7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 VMACQ2NL98 169 aa7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 NOL9Q5SY16 702 aaKnown RBP7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 CWF19L1Q69YN2 538 aaKnown RBP7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 RPTNQ6XPR3 784 aa7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 UNC5AQ6ZN44 842 aa7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 CCDC81Q6ZN84 652 aa7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 IGDCC3Q8IVU1 814 aa7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 TMEM151BQ8IW70 566 aa7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 TMEFF1Q8IYR6 380 aa7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 MARCH10Q8NA82 808 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 GP6Q9HCN6 339 aa7.11□□□□□ -1.27
SMCHD1-208ENST00000583344 GUCY2CP25092 1073 aa7.1□□□□□ -1.27
SMCHD1-208ENST00000583344 MVKQ03426 396 aa7.1□□□□□ -1.27
SMCHD1-208ENST00000583344 LDHDQ86WU2 507 aa7.1□□□□□ -1.27
SMCHD1-208ENST00000583344 LSRQ86X29 649 aaPredicted RBP7.1□□□□□ -1.27
SMCHD1-208ENST00000583344 FIBCD1Q8N539 461 aa7.1□□□□□ -1.27
SMCHD1-208ENST00000583344 SMARCC1Q92922 1105 aaPredicted RBP7.1□□□□□ -1.27
SMCHD1-208ENST00000583344 METTL5Q9NRN9 209 aaKnown RBP7.1□□□□□ -1.27
SMCHD1-208ENST00000583344 ZNF451Q9Y4E5 1061 aa7.1□□□□□ -1.27
SMCHD1-208ENST00000583344 PLEKHN1Q494U1 663 aaPredicted RBP7.09□□□□□ -1.27
SMCHD1-208ENST00000583344 CNKSR3Q6P9H4 555 aa7.09□□□□□ -1.27
SMCHD1-208ENST00000583344 RNF34Q969K3 372 aa7.09□□□□□ -1.27
SMCHD1-208ENST00000583344 PCDHA5Q9Y5H7 936 aa7.09□□□□□ -1.27
SMCHD1-208ENST00000583344 FHOD1Q9Y613 1164 aa7.09□□□□□ -1.27
SMCHD1-208ENST00000583344 FGF10O15520 208 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-208ENST00000583344 IFNGR1P15260 489 aa7.08□□□□□ -1.28
SMCHD1-208ENST00000583344 CD247P20963 164 aa7.08□□□□□ -1.28
SMCHD1-208ENST00000583344 ANKRD39Q53RE8 183 aa7.08□□□□□ -1.28
SMCHD1-208ENST00000583344 FAM129CQ86XR2 697 aa7.08□□□□□ -1.28
SMCHD1-208ENST00000583344 JAMLQ86YT9 394 aa7.08□□□□□ -1.28
SMCHD1-208ENST00000583344 RBBP8NLQ8NC74 664 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-208ENST00000583344 ZDHHC15Q96MV8 337 aa7.08□□□□□ -1.28
SMCHD1-208ENST00000583344 NOL6Q9H6R4 1146 aaKnown RBP7.08□□□□□ -1.28
SMCHD1-208ENST00000583344 DDX41Q9UJV9 622 aaKnown RBP7.08□□□□□ -1.28
SMCHD1-208ENST00000583344 LTBP3Q9NS15 1303 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 A0A1W2PQ27 194 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 A0A1W2PQ64 194 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 A0A1W2PQC6 194 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 A0A1W2PQD8 194 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 CBFA2T2O43439 604 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 RECKO95980 971 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 CD3EP07766 207 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 TMEM62Q0P6H9 643 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 CBX2Q14781 532 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 HLA-DQA1Q5Y7H0 255 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 FCRL3Q96P31 734 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 SRRTQ9BXP5 876 aaKnown RBP7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 GINM1Q9NU53 330 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 ZNF214Q9UL59 606 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 HCFC2Q9Y5Z7 792 aa7.07□□□□□ -1.28
SMCHD1-208ENST00000583344 BUB1BO60566 1050 aaPredicted RBP7.06□□□□□ -1.28
SMCHD1-208ENST00000583344 ITGA4P13612 1032 aa7.06□□□□□ -1.28
SMCHD1-208ENST00000583344 TACR1P25103 407 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms