RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MRVI1Q9Y6F6 885 aa6.42□□□□□ -1.38
NUP88-202ENST00000570937 MRC2Q9UBG0 1479 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 H0Y8X5 98 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 SMAD7O15105 426 aaKnown RBP6.41□□□□□ -1.38
NUP88-202ENST00000570937 NRDCO43847 1150 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 EPHX1P07099 455 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 TRHRP34981 398 aaPredicted RBP6.41□□□□□ -1.38
NUP88-202ENST00000570937 ETFBP38117 255 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 ZNF143P52747 638 aaPredicted RBP6.41□□□□□ -1.38
NUP88-202ENST00000570937 ZC3H6P61129 1189 aaKnown RBP6.41□□□□□ -1.38
NUP88-202ENST00000570937 TIGD5Q53EQ6 642 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 RTP2Q5QGT7 225 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 CWF19L1Q69YN2 538 aaKnown RBP6.41□□□□□ -1.38
NUP88-202ENST00000570937 KIAA1211LQ6NV74 962 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 ZPBP2Q6X784 338 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 LIN37Q96GY3 246 aaPredicted RBP6.41□□□□□ -1.38
NUP88-202ENST00000570937 RCC1LQ96I51 464 aaKnown RBP6.41□□□□□ -1.38
NUP88-202ENST00000570937 HHIPL1Q96JK4 782 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 GBP3Q9H0R5 595 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 NOL6Q9H6R4 1146 aaKnown RBP6.41□□□□□ -1.38
NUP88-202ENST00000570937 CWC22Q9HCG8 908 aaKnown RBP6.41□□□□□ -1.38
NUP88-202ENST00000570937 ERVK13-1Q9NX77 482 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 ACTR10Q9NZ32 417 aa6.41□□□□□ -1.38
NUP88-202ENST00000570937 FADS2P1A8MWK0 482 aa6.4□□□□□ -1.38
NUP88-202ENST00000570937 DNAJA1P31689 397 aaKnown RBP6.4□□□□□ -1.38
NUP88-202ENST00000570937 NOP2P46087 812 aaKnown RBP6.4□□□□□ -1.38
NUP88-202ENST00000570937 CEBPAP49715 358 aaPredicted RBP6.4□□□□□ -1.38
NUP88-202ENST00000570937 NCAPHQ15003 741 aa6.4□□□□□ -1.38
NUP88-202ENST00000570937 ARHGEF39Q8N4T4 335 aa6.4□□□□□ -1.38
NUP88-202ENST00000570937 ZNF513Q8N8E2 541 aaPredicted RBP6.4□□□□□ -1.38
NUP88-202ENST00000570937 SHISA4Q96DD7 197 aa6.4□□□□□ -1.38
NUP88-202ENST00000570937 RNF32Q9H0A6 362 aa6.4□□□□□ -1.38
NUP88-202ENST00000570937 C19orf44Q9H6X5 657 aa6.4□□□□□ -1.38
NUP88-202ENST00000570937 ZNF408Q9H9D4 720 aa6.4□□□□□ -1.38
NUP88-202ENST00000570937 KIF21AQ7Z4S6 1674 aa6.39□□□□□ -1.39
NUP88-202ENST00000570937 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
NUP88-202ENST00000570937 LRRC10BA6NIK2 292 aa6.39□□□□□ -1.39
NUP88-202ENST00000570937 USP2O75604 605 aaPredicted RBP6.39□□□□□ -1.39
NUP88-202ENST00000570937 PPM1BO75688 479 aa6.39□□□□□ -1.39
NUP88-202ENST00000570937 POU4F1Q01851 419 aa6.39□□□□□ -1.39
NUP88-202ENST00000570937 NLRX1Q86UT6 975 aa6.39□□□□□ -1.39
NUP88-202ENST00000570937 CDADC1Q9BWV3 514 aa6.39□□□□□ -1.39
NUP88-202ENST00000570937 AP5S1Q9NUS5 200 aa6.39□□□□□ -1.39
NUP88-202ENST00000570937 YBX2Q9Y2T7 364 aaKnown RBP6.39□□□□□ -1.39
NUP88-202ENST00000570937 ARID1BQ8NFD5 2236 aaPredicted RBP6.39□□□□□ -1.39
NUP88-202ENST00000570937 ABCC8Q09428 1581 aa6.39□□□□□ -1.39
NUP88-202ENST00000570937 A0A1W2PQ45 241 aaPredicted RBP6.38□□□□□ -1.39
NUP88-202ENST00000570937 A0A1W2PQY0 241 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 PSPNO60542 156 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 NAT2P11245 290 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 YBX3P16989 372 aaKnown RBP eCLIP6.38□□□□□ -1.39
NUP88-202ENST00000570937 MESP2Q0VG99 397 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 GRB10Q13322 594 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 MPZL3Q6UWV2 235 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 CEP128Q6ZU80 1094 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 IRF2BP1Q8IU81 584 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 TMEM52Q8NDY8 209 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 FGD4Q96M96 766 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 C8orf37Q96NL8 207 aa6.38□□□□□ -1.39
NUP88-202ENST00000570937 FCRL3Q96P31 734 aaPredicted RBP6.38□□□□□ -1.39
NUP88-202ENST00000570937 THOC2Q8NI27 1593 aaKnown RBP6.38□□□□□ -1.39
NUP88-202ENST00000570937 WDR62O43379 1518 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 FGF10O15520 208 aaPredicted RBP6.37□□□□□ -1.39
NUP88-202ENST00000570937 FARP2O94887 1054 aaPredicted RBP6.37□□□□□ -1.39
NUP88-202ENST00000570937 EFEMP2O95967 443 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 GSTM1P09488 218 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 RTP1P59025 263 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 SLC14A2Q15849 920 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 MLANAQ16655 118 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 NAALADL2Q58DX5 795 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 CYP2R1Q6VVX0 501 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 PRR23BQ6ZRT6 265 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 ADAT2Q7Z6V5 191 aaKnown RBP6.37□□□□□ -1.39
NUP88-202ENST00000570937 SLCO6A1Q86UG4 719 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 ADCY4Q8NFM4 1077 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 ZDHHC15Q96MV8 337 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 APBA2Q99767 749 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 SLC6A17Q9H1V8 727 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 CRTAC1Q9NQ79 661 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 CGGBP1Q9UFW8 167 aaPredicted RBP6.37□□□□□ -1.39
NUP88-202ENST00000570937 GPR160Q9UJ42 338 aa6.37□□□□□ -1.39
NUP88-202ENST00000570937 GPR55Q9Y2T6 319 aaPredicted RBP6.37□□□□□ -1.39
NUP88-202ENST00000570937 WTIPA6NIX2 430 aaPredicted RBP6.36□□□□□ -1.39
NUP88-202ENST00000570937 PPP2R5DQ14738 602 aa6.36□□□□□ -1.39
NUP88-202ENST00000570937 FXNQ16595 210 aa6.36□□□□□ -1.39
NUP88-202ENST00000570937 HSF5Q4G112 596 aaPredicted RBP6.36□□□□□ -1.39
NUP88-202ENST00000570937 GALNT18Q6P9A2 607 aa6.36□□□□□ -1.39
NUP88-202ENST00000570937 C6orf15Q6UXA7 325 aaPredicted RBP6.36□□□□□ -1.39
NUP88-202ENST00000570937 FAM178BQ8IXR5 827 aa6.36□□□□□ -1.39
NUP88-202ENST00000570937 BHLHE22Q8NFJ8 381 aaPredicted RBP6.36□□□□□ -1.39
NUP88-202ENST00000570937 INTS4Q96HW7 963 aaKnown RBP6.36□□□□□ -1.39
NUP88-202ENST00000570937 FAM84AQ96KN4 292 aa6.36□□□□□ -1.39
NUP88-202ENST00000570937 APEX2Q9UBZ4 518 aa6.36□□□□□ -1.39
NUP88-202ENST00000570937 AURKAO14965 403 aa6.35□□□□□ -1.39
NUP88-202ENST00000570937 CD3EP07766 207 aa6.35□□□□□ -1.39
NUP88-202ENST00000570937 IFNGR1P15260 489 aa6.35□□□□□ -1.39
NUP88-202ENST00000570937 HLA-DQA1Q5Y7H0 255 aa6.35□□□□□ -1.39
NUP88-202ENST00000570937 LARP1BQ659C4 914 aaKnown RBP6.35□□□□□ -1.39
NUP88-202ENST00000570937 RCSD1Q6JBY9 416 aa6.35□□□□□ -1.39
NUP88-202ENST00000570937 PLCD4Q9BRC7 762 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms