RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ERVK13-1Q9NX77 482 aa6.63□□□□□ -1.35
PALB2-203ENST00000565038 FITM1A5D6W6 292 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 STXBP3O00186 592 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 PSPNO60542 156 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 KCNH1O95259 989 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 NAT2P11245 290 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 ZNF143P52747 638 aaPredicted RBP6.62□□□□□ -1.35
PALB2-203ENST00000565038 SLC14A2Q15849 920 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 CEP128Q6ZU80 1094 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 SPPL2CQ8IUH8 684 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 NAT16Q8N8M0 369 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 ANKS4BQ8N8V4 417 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 BVESQ8NE79 360 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 ASIC4Q96FT7 647 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 FCRL2Q96LA5 508 aaPredicted RBP6.62□□□□□ -1.35
PALB2-203ENST00000565038 RNF32Q9H0A6 362 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 LRP2BPQ9P2M1 347 aa6.62□□□□□ -1.35
PALB2-203ENST00000565038 GPR55Q9Y2T6 319 aaPredicted RBP6.62□□□□□ -1.35
PALB2-203ENST00000565038 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.62□□□□□ -1.35
PALB2-203ENST00000565038 NOTOA8MTQ0 251 aa6.61□□□□□ -1.35
PALB2-203ENST00000565038 NOP56O00567 594 aaKnown RBP6.61□□□□□ -1.35
PALB2-203ENST00000565038 EFEMP2O95967 443 aa6.61□□□□□ -1.35
PALB2-203ENST00000565038 ENDOUP21128 410 aaKnown RBP6.61□□□□□ -1.35
PALB2-203ENST00000565038 AMPD2Q01433 879 aa6.61□□□□□ -1.35
PALB2-203ENST00000565038 CHRNEQ04844 493 aa6.61□□□□□ -1.35
PALB2-203ENST00000565038 TMEM67Q5HYA8 995 aa6.61□□□□□ -1.35
PALB2-203ENST00000565038 TMEM52Q8NDY8 209 aa6.61□□□□□ -1.35
PALB2-203ENST00000565038 LIN37Q96GY3 246 aaPredicted RBP6.61□□□□□ -1.35
PALB2-203ENST00000565038 GPR160Q9UJ42 338 aa6.61□□□□□ -1.35
PALB2-203ENST00000565038 EMC9Q9Y3B6 208 aa6.61□□□□□ -1.35
PALB2-203ENST00000565038 ZNF503-AS2A6NEH8 195 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 FADS2P1A8MWK0 482 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 AURKAO14965 403 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 TBX1O43435 398 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 ITGAVP06756 1048 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 GLI1P08151 1106 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 KIR2DL1P43626 348 aaPredicted RBP6.6□□□□□ -1.35
PALB2-203ENST00000565038 KIR2DL2P43627 348 aaPredicted RBP6.6□□□□□ -1.35
PALB2-203ENST00000565038 CEBPAP49715 358 aaPredicted RBP6.6□□□□□ -1.35
PALB2-203ENST00000565038 RTP1P59025 263 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 KIR3DS1Q14943 382 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 SF3A1Q15459 793 aaKnown RBP6.6□□□□□ -1.35
PALB2-203ENST00000565038 NR0B2Q15466 257 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 EEPD1Q7L9B9 569 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 SIRT2Q8IXJ6 389 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 TNFRSF10DQ9UBN6 386 aa6.6□□□□□ -1.35
PALB2-203ENST00000565038 CCDC85CA6NKD9 419 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.59□□□□□ -1.35
PALB2-203ENST00000565038 U2SURPO15042 1029 aaKnown RBP6.59□□□□□ -1.35
PALB2-203ENST00000565038 FGF10O15520 208 aaPredicted RBP6.59□□□□□ -1.35
PALB2-203ENST00000565038 GRB10Q13322 594 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 SLC10A6Q3KNW5 377 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 GTF2IRD2BQ6EKJ0 949 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 POMZP3Q6PJE2 187 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 GTF2IRD2Q86UP8 949 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 ZNF227Q86WZ6 799 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 LILRA2Q8N149 483 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 SREK1Q8WXA9 508 aaKnown RBP6.59□□□□□ -1.35
PALB2-203ENST00000565038 MRGPRX3Q96LB0 322 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 PTCHD1Q96NR3 888 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 PLCD4Q9BRC7 762 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 RNF114Q9Y508 228 aa6.59□□□□□ -1.35
PALB2-203ENST00000565038 C2orf71A6NGG8 1288 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 PAX4O43316 350 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 NRDCO43847 1150 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 SEPHS1P49903 392 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 HSF5Q4G112 596 aaPredicted RBP6.58□□□□□ -1.36
PALB2-203ENST00000565038 MPZL3Q6UWV2 235 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 TRIM59Q8IWR1 403 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 CRACR2BQ8N4Y2 399 aaPredicted RBP6.58□□□□□ -1.36
PALB2-203ENST00000565038 PMFBP1Q8TBY8 1022 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 BTN2A2Q8WVV5 523 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 SHISA4Q96DD7 197 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 JMJD8Q96S16 334 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 HIRIP3Q9BW71 556 aaPredicted RBP6.58□□□□□ -1.36
PALB2-203ENST00000565038 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.58□□□□□ -1.36
PALB2-203ENST00000565038 BACE2Q9Y5Z0 518 aa6.58□□□□□ -1.36
PALB2-203ENST00000565038 RBL2Q08999 1139 aa6.57□□□□□ -1.36
PALB2-203ENST00000565038 HLA-DQA1Q5Y7H0 255 aa6.57□□□□□ -1.36
PALB2-203ENST00000565038 RCSD1Q6JBY9 416 aa6.57□□□□□ -1.36
PALB2-203ENST00000565038 SLCO6A1Q86UG4 719 aa6.57□□□□□ -1.36
PALB2-203ENST00000565038 NLRX1Q86UT6 975 aa6.57□□□□□ -1.36
PALB2-203ENST00000565038 ARMC5Q96C12 935 aa6.57□□□□□ -1.36
PALB2-203ENST00000565038 DNAJC2Q99543 621 aaKnown RBP6.57□□□□□ -1.36
PALB2-203ENST00000565038 GPRC5CQ9NQ84 441 aa6.57□□□□□ -1.36
PALB2-203ENST00000565038 TAF6LQ9Y6J9 622 aa6.57□□□□□ -1.36
PALB2-203ENST00000565038 WTIPA6NIX2 430 aaPredicted RBP6.56□□□□□ -1.36
PALB2-203ENST00000565038 SCRN1Q12765 414 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 SF1Q15637 639 aaKnown RBP6.56□□□□□ -1.36
PALB2-203ENST00000565038 MLANAQ16655 118 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 EEF1DP3Q658K8 133 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 GALNT18Q6P9A2 607 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 CYP2R1Q6VVX0 501 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 PRR23BQ6ZRT6 265 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 CPNE8Q86YQ8 564 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 JAMLQ86YT9 394 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 EPN3Q9H201 632 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 KCNK12Q9HB15 430 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 IMPACTQ9P2X3 320 aa6.56□□□□□ -1.36
PALB2-203ENST00000565038 A0A1W2PQ45 241 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms