RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 RNF4P78317 190 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 CHRNEQ04844 493 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 LRRFIP1Q32MZ4 808 aaKnown RBP5.21□□□□□ -1.58
CHD9-211ENST00000564600 BBS9Q3SYG4 887 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 FBXW10Q5XX13 1052 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 LSRQ86X29 649 aaPredicted RBP5.21□□□□□ -1.58
CHD9-211ENST00000564600 TMEM151BQ8IW70 566 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 ZNF654Q8IZM8 581 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 ADGRG2Q8IZP9 1017 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 SYTL5Q8TDW5 730 aaPredicted RBP5.21□□□□□ -1.58
CHD9-211ENST00000564600 FERD3LQ96RJ6 166 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 BDH2Q9BUT1 245 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 FAM86C1Q9NVL1 165 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 GFOD1Q9NXC2 390 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 EFR3BQ9Y2G0 817 aa5.21□□□□□ -1.58
CHD9-211ENST00000564600 N4BP3O15049 544 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 SIGLEC6O43699 453 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 PRICKLE3O43900 615 aaPredicted RBP5.2□□□□□ -1.58
CHD9-211ENST00000564600 ADRB1P08588 477 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 CHMP4BP1P59074 171 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 SNX17Q15036 470 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 SLC14A2Q15849 920 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 DCAF15Q66K64 600 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 INTS3Q68E01 1043 aaKnown RBP5.2□□□□□ -1.58
CHD9-211ENST00000564600 CNKSR3Q6P9H4 555 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 UNC5AQ6ZN44 842 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 FAM129CQ86XR2 697 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 TP53I13Q8NBR0 393 aaPredicted RBP5.2□□□□□ -1.58
CHD9-211ENST00000564600 RBBP8NLQ8NC74 664 aaPredicted RBP5.2□□□□□ -1.58
CHD9-211ENST00000564600 DAGLBQ8NCG7 672 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 HHIPL1Q96JK4 782 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 MKRN2Q9H000 416 aaKnown RBP5.2□□□□□ -1.58
CHD9-211ENST00000564600 ACBD3Q9H3P7 528 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 SUCOQ9UBS9 1254 aaKnown RBP5.2□□□□□ -1.58
CHD9-211ENST00000564600 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.2□□□□□ -1.58
CHD9-211ENST00000564600 LTBP3Q9NS15 1303 aa5.2□□□□□ -1.58
CHD9-211ENST00000564600 LIMS1P48059 325 aa5.19□□□□□ -1.58
CHD9-211ENST00000564600 SOX9P48436 509 aa5.19□□□□□ -1.58
CHD9-211ENST00000564600 CEBPAP49715 358 aaPredicted RBP5.19□□□□□ -1.58
CHD9-211ENST00000564600 PLP2Q04941 152 aa5.19□□□□□ -1.58
CHD9-211ENST00000564600 AUHQ13825 339 aaKnown RBP5.19□□□□□ -1.58
CHD9-211ENST00000564600 PUM1Q14671 1186 aaKnown RBP eCLIP5.19□□□□□ -1.58
CHD9-211ENST00000564600 RTP5Q14D33 572 aa5.19□□□□□ -1.58
CHD9-211ENST00000564600 AXDND1Q5T1B0 1012 aaPredicted RBP5.19□□□□□ -1.58
CHD9-211ENST00000564600 TMC6Q7Z403 805 aa5.19□□□□□ -1.58
CHD9-211ENST00000564600 IGDCC3Q8IVU1 814 aa5.19□□□□□ -1.58
CHD9-211ENST00000564600 ENOX1Q8TC92 643 aaKnown RBP5.19□□□□□ -1.58
CHD9-211ENST00000564600 MZB1Q8WU39 189 aa5.19□□□□□ -1.58
CHD9-211ENST00000564600 MAP6Q96JE9 813 aa5.19□□□□□ -1.58
CHD9-211ENST00000564600 PWWP2AQ96N64 755 aa5.19□□□□□ -1.58
CHD9-211ENST00000564600 TCFL5Q9UL49 500 aa5.19□□□□□ -1.58
CHD9-211ENST00000564600 A0A1B0GTL3 188 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 NUDT19A8MXV4 375 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 IRS4O14654 1257 aaPredicted RBP5.18□□□□□ -1.58
CHD9-211ENST00000564600 NRDCO43847 1150 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 TP53P04637 393 aaPredicted RBP5.18□□□□□ -1.58
CHD9-211ENST00000564600 SYPP08247 313 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 GUCY2CP25092 1073 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 GJA8P48165 433 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 TAB3Q8N5C8 712 aaPredicted RBP5.18□□□□□ -1.58
CHD9-211ENST00000564600 ZNF655Q8N720 491 aaPredicted RBP5.18□□□□□ -1.58
CHD9-211ENST00000564600 LINC00116Q8NCU8 138 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 RASGRP4Q8TDF6 673 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 GPRASP2Q96D09 838 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 TM9SF2Q99805 663 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 ASCC2Q9H1I8 757 aaPredicted RBP5.18□□□□□ -1.58
CHD9-211ENST00000564600 CHST7Q9NS84 486 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 KLHL14Q9P2G3 628 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 PLA2G2DQ9UNK4 145 aa5.18□□□□□ -1.58
CHD9-211ENST00000564600 IMPDH2P12268 514 aa5.17□□□□□ -1.58
CHD9-211ENST00000564600 PMS1P54277 932 aaKnown RBP5.17□□□□□ -1.58
CHD9-211ENST00000564600 CRTC3Q6UUV7 619 aa5.17□□□□□ -1.58
CHD9-211ENST00000564600 RNF111Q6ZNA4 994 aa5.17□□□□□ -1.58
CHD9-211ENST00000564600 LDHDQ86WU2 507 aa5.17□□□□□ -1.58
CHD9-211ENST00000564600 CCDC144CPQ8IYA2 1237 aa5.17□□□□□ -1.58
CHD9-211ENST00000564600 C7orf61Q8IZ16 206 aa5.17□□□□□ -1.58
CHD9-211ENST00000564600 FAM169BQ8N8A8 192 aa5.17□□□□□ -1.58
CHD9-211ENST00000564600 FBXL21Q9UKT6 434 aa5.17□□□□□ -1.58
CHD9-211ENST00000564600 PCDHB10Q9UN67 800 aa5.17□□□□□ -1.58
CHD9-211ENST00000564600 PCDHB12Q9Y5F1 795 aa5.17□□□□□ -1.58
CHD9-211ENST00000564600 GIPRP48546 466 aa5.16□□□□□ -1.58
CHD9-211ENST00000564600 NASPP49321 788 aaPredicted RBP5.16□□□□□ -1.58
CHD9-211ENST00000564600 PCBP3P57721 371 aaKnown RBP5.16□□□□□ -1.58
CHD9-211ENST00000564600 ZNF445P59923 1031 aa5.16□□□□□ -1.58
CHD9-211ENST00000564600 RAB3GAP1Q15042 981 aa5.16□□□□□ -1.58
CHD9-211ENST00000564600 ZXDCQ2QGD7 858 aaPredicted RBP5.16□□□□□ -1.58
CHD9-211ENST00000564600 FERMT3Q86UX7 667 aa5.16□□□□□ -1.58
CHD9-211ENST00000564600 BRF1Q92994 677 aa5.16□□□□□ -1.58
CHD9-211ENST00000564600 SHDQ96IW2 340 aa5.16□□□□□ -1.58
CHD9-211ENST00000564600 ZNF214Q9UL59 606 aaPredicted RBP5.16□□□□□ -1.58
CHD9-211ENST00000564600 GPR55Q9Y2T6 319 aaPredicted RBP5.16□□□□□ -1.58
CHD9-211ENST00000564600 ZNF451Q9Y4E5 1061 aa5.16□□□□□ -1.58
CHD9-211ENST00000564600 HCFC2Q9Y5Z7 792 aa5.16□□□□□ -1.58
CHD9-211ENST00000564600 SSU72P8A0A1W2PR75 194 aa5.15□□□□□ -1.59
CHD9-211ENST00000564600 FFAR3O14843 346 aa5.15□□□□□ -1.59
CHD9-211ENST00000564600 CBFA2T2O43439 604 aa5.15□□□□□ -1.59
CHD9-211ENST00000564600 BUB1BO60566 1050 aaPredicted RBP5.15□□□□□ -1.59
CHD9-211ENST00000564600 RTP1P59025 263 aa5.15□□□□□ -1.59
CHD9-211ENST00000564600 YBX1P67809 324 aaKnown RBP5.15□□□□□ -1.59
CHD9-211ENST00000564600 HSF5Q4G112 596 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms