RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 IMPACTQ9P2X3 320 aa4.39□□□□□ -1.71
SUB1P3-201ENST00000564581 TAF6LQ9Y6J9 622 aa4.39□□□□□ -1.71
SUB1P3-201ENST00000564581 WTIPA6NIX2 430 aaPredicted RBP4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 PMS1P54277 932 aaKnown RBP4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 ERVFRD-1P60508 538 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 YBX1P67809 324 aaKnown RBP4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 CYP4F8P98187 520 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 RAB3GAP1Q15042 981 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 ZNF385BQ569K4 471 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 UNC5AQ6ZN44 842 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 TMC6Q7Z403 805 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 SIGLEC10Q96LC7 697 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 DHRS1Q96LJ7 313 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 ZCCHC4Q9H5U6 513 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 ZNF451Q9Y4E5 1061 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 HCFC2Q9Y5Z7 792 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 IRAK3Q9Y616 596 aa4.38□□□□□ -1.71
SUB1P3-201ENST00000564581 N4BP3O15049 544 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 TRIM13O60858 407 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 MPOP05164 745 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 GSNP06396 782 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 CTSWP56202 376 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 MVKQ03426 396 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 NOL9Q5SY16 702 aaKnown RBP4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 TCERG1LQ5VWI1 586 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 LDHDQ86WU2 507 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 IGDCC3Q8IVU1 814 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 TMEFF1Q8IYR6 380 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 RNF34Q969K3 372 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 GP6Q9HCN6 339 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 PARD6AQ9NPB6 346 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 ACSL6Q9UKU0 697 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 PLA2G2DQ9UNK4 145 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 LTBP3Q9NS15 1303 aa4.37□□□□□ -1.71
SUB1P3-201ENST00000564581 A0A0G2JLL6 359 aaPredicted RBP4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 A0A1W2PQ45 241 aaPredicted RBP4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 A0A1W2PQY0 241 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 B8ZZF3 427 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 IFNGR1P15260 489 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 CD247P20963 164 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 ARL4AP40617 200 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 BUD31P41223 144 aaPredicted RBP4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 MFAP1P55081 439 aaKnown RBP4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 PPP2R5DQ14738 602 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 RPTNQ6XPR3 784 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 LSRQ86X29 649 aaPredicted RBP4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 FIBCD1Q8N539 461 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 NAT16Q8N8M0 369 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 MARCH10Q8NA82 808 aaPredicted RBP4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 MZB1Q8WU39 189 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 DACT3Q96B18 629 aaPredicted RBP4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 FCRL3Q96P31 734 aaPredicted RBP4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 KCNC2Q96PR1 638 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 TM9SF2Q99805 663 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 BCL11AQ9H165 835 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 NOL6Q9H6R4 1146 aaKnown RBP4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 TNFRSF12AQ9NP84 129 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 GINM1Q9NU53 330 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 DDX41Q9UJV9 622 aaKnown RBP4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 PCDHB10Q9UN67 800 aa4.36□□□□□ -1.71
SUB1P3-201ENST00000564581 HRKO00198 91 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 RFXAPO00287 272 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 IRS4O14654 1257 aaPredicted RBP4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 PRRG2O14669 202 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 RECKO95980 971 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 IMPDH2P12268 514 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 GUCY2CP25092 1073 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 TACR1P25103 407 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 AFF3P51826 1226 aaKnown RBP4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 PAK2Q13177 524 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 LAPTM5Q13571 262 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 ANKRD39Q53RE8 183 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 C9orf131Q5VYM1 1079 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 CWF19L1Q69YN2 538 aaKnown RBP4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 ADCY4Q8NFM4 1077 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 ZDHHC15Q96MV8 337 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 MCMBPQ9BTE3 642 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 PRR13Q9NZ81 148 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 NCANO14594 1321 aa4.35□□□□□ -1.71
SUB1P3-201ENST00000564581 A0A1W2PQ27 194 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 A0A1W2PQ64 194 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 A0A1W2PQC6 194 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 A0A1W2PQD8 194 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 FGF10O15520 208 aaPredicted RBP4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 CBFA2T2O43439 604 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 BUB1BO60566 1050 aaPredicted RBP4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 VAMP4O75379 141 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 CD3EP07766 207 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 LIMS1P48059 325 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 ZNF200P98182 395 aaPredicted RBP4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 HLA-DQA1Q5Y7H0 255 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 CNKSR3Q6P9H4 555 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 FAM129CQ86XR2 697 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 JAMLQ86YT9 394 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 ZDHHC14Q8IZN3 488 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 TAB3Q8N5C8 712 aaPredicted RBP4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 SYT8Q8NBV8 401 aa4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 RBBP8NLQ8NC74 664 aaPredicted RBP4.34□□□□□ -1.71
SUB1P3-201ENST00000564581 FEZF2Q8TBJ5 459 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms