RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 ZNF280CQ8ND82 737 aa16.41■□□□□ 0.22
RABGGTA-209ENST00000559551 CCDC148Q8NFR7 591 aa16.41■□□□□ 0.22
RABGGTA-209ENST00000559551 CLMNQ96JQ2 1002 aa16.41■□□□□ 0.22
RABGGTA-209ENST00000559551 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
RABGGTA-209ENST00000559551 LOC285556D6RIA3 1793 aa16.4■□□□□ 0.22
RABGGTA-209ENST00000559551 ESYT2A0FGR8 921 aa16.4■□□□□ 0.22
RABGGTA-209ENST00000559551 TRIM75PA6NK02 468 aa16.4■□□□□ 0.22
RABGGTA-209ENST00000559551 PLA2G6O60733 806 aa16.4■□□□□ 0.22
RABGGTA-209ENST00000559551 VCAM1P19320 739 aa16.4■□□□□ 0.22
RABGGTA-209ENST00000559551 PTMSP20962 102 aa16.4■□□□□ 0.22
RABGGTA-209ENST00000559551 CALML3P27482 149 aa16.4■□□□□ 0.22
RABGGTA-209ENST00000559551 UBE2HP62256 183 aa16.4■□□□□ 0.22
RABGGTA-209ENST00000559551 NMRK2Q9NPI5 230 aa16.4■□□□□ 0.22
RABGGTA-209ENST00000559551 PICK1Q9NRD5 415 aa16.4■□□□□ 0.22
RABGGTA-209ENST00000559551 hCG_1984214I3L0E3 225 aa16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 PIK3AP1Q6ZUJ8 805 aa16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 FAM177A1Q8N128 213 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 ZNF713Q8N859 430 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 TMEM260Q9NX78 707 aa16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 OPLAHO14841 1288 aa16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 WDR46O15213 610 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 EDIL3O43854 480 aa16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 YEATS4O95619 227 aa16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 IKQ13123 557 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 MAP3K11Q16584 847 aa16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 RANBP17Q9H2T7 1088 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 TMEM63CQ9P1W3 806 aa16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 PCDHA7Q9UN72 937 aa16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 MRVI1Q9Y6F6 885 aa16.39■□□□□ 0.21
RABGGTA-209ENST00000559551 PPP1R12BO60237 982 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 HMGCS2P54868 508 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 SLC39A14Q15043 492 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 SKOR2Q2VWA4 1001 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 RILPL1Q5EBL4 403 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 GALNT17Q6IS24 598 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 LPAR1Q92633 364 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 KIFC2Q96AC6 838 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 BRMS1Q9HCU9 246 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 LIG1P18858 919 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 ATP2B1P20020 1258 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 AXDND1Q5T1B0 1012 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 C12orf42Q96LP6 360 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 P2RX7Q99572 595 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 GZF1Q9H116 711 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 AS3MTQ9HBK9 375 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 FEM1BQ9UK73 627 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 PCDHA1Q9Y5I3 950 aa16.38■□□□□ 0.21
RABGGTA-209ENST00000559551 SPTLC2O15270 562 aa16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 MARCKSP29966 332 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 CLK2P49760 499 aaKnown RBP16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 STK38Q15208 465 aa16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 UBE2SQ16763 222 aa16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 CSPP1Q1MSJ5 1256 aa16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 CCDC12Q8WUD4 166 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 C6orf50Q9HD87 102 aa16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 RIC8AQ9NPQ8 531 aa16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 BIN2Q9UBW5 565 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 ZNF536O15090 1300 aa16.37■□□□□ 0.21
RABGGTA-209ENST00000559551 USH1GQ495M9 461 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 CAVIN1Q6NZI2 390 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 FAM160B2Q86V87 743 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 CHURC1Q8WUH1 139 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 WNK4Q96J92 1243 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 AMNQ9BXJ7 453 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 GOLPH3LQ9H4A5 285 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 RPAP3Q9H6T3 665 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 ELP3Q9H9T3 547 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 TRPM7Q96QT4 1865 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 IREB2P48200 963 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 ADCY7P51828 1080 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 USP14P54578 494 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 GRIN1Q05586 938 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 INF2Q27J81 1249 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 JAKMIP3Q5VZ66 844 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 CCDC174Q6PII3 467 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 FBXO11Q86XK2 927 aa16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 ZNF526Q8TF50 670 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-209ENST00000559551 MBD3O95983 291 aa16.35■□□□□ 0.21
RABGGTA-209ENST00000559551 GNA11P29992 359 aa16.35■□□□□ 0.21
RABGGTA-209ENST00000559551 SH3D19Q5HYK7 790 aa16.35■□□□□ 0.21
RABGGTA-209ENST00000559551 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-209ENST00000559551 SLF1Q9BQI6 1058 aa16.35■□□□□ 0.21
RABGGTA-209ENST00000559551 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-209ENST00000559551 USP17L15C9J2P7 530 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 C19orf81C9J6K1 198 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 USP17L13C9JLJ4 530 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 USP17L11C9JVI0 530 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 USP17L18D6R9N7 530 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 USP17L22D6RA61 530 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 USP17L17D6RBQ6 530 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 USP17L19D6RCP7 530 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 USP17L20D6RJB6 530 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 MEIS2O14770 477 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 NF2P35240 595 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 ME1P48163 572 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 USP17L24Q0WX57 530 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 ZNF174Q15697 407 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms