RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 RTL9Q8NET4 1388 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 MAGEC3Q8TD91 643 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 HDAC7Q8WUI4 952 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 ALS2CR12Q96Q35 445 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 PLA2G12BQ9BX93 195 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 PIH1D3Q9NQM4 214 aaKnown RBP8.67□□□□□ -1.02
CHD8-209ENST00000555935 EXOC1Q9NV70 894 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 TFR2Q9UP52 801 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 AXIN2Q9Y2T1 843 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 NUP188Q5SRE5 1749 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 TCRBV5S4A2TA0A5A2 114 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 HMGB1P1B2RPK0 211 aaPredicted RBP8.67□□□□□ -1.02
CHD8-209ENST00000555935 NR1D1P20393 614 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 TRAPPC10P48553 1259 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 PAK2Q13177 524 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 KCNB1Q14721 858 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 EZH2Q15910 746 aaKnown RBP8.67□□□□□ -1.02
CHD8-209ENST00000555935 C8orf74Q6P047 294 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 IQCKQ8N0W5 287 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 RNPC3Q96LT9 517 aaKnown RBP8.67□□□□□ -1.02
CHD8-209ENST00000555935 OSBPL9Q96SU4 736 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 SH2D4AQ9H788 454 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 RNF14Q9UBS8 474 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 TSKSQ9UJT2 592 aa8.67□□□□□ -1.02
CHD8-209ENST00000555935 GLI3P10071 1580 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 RIC1Q4ADV7 1423 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 FAM205CA6NFA0 338 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 PES1O00541 588 aaKnown RBP8.66□□□□□ -1.02
CHD8-209ENST00000555935 PSMA7O14818 248 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 FAM107AO95990 144 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 MYL1P05976 194 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 UQCRFS1P1P0C7P4 283 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 TDO2P48775 406 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 CABP4P57796 275 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 CTDSPL2Q05D32 466 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 IFIT5Q13325 482 aaKnown RBP8.66□□□□□ -1.02
CHD8-209ENST00000555935 CCDC96Q2M329 555 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 ESCO1Q5FWF5 840 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 CEP85LQ5SZL2 805 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 TAX1BP1Q86VP1 789 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 NLRP14Q86W24 1093 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 CCDC13Q8IYE1 715 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 ARFGAP2Q8N6H7 521 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 MYCBPAPQ8TBZ2 947 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 STAMQ92783 540 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 CCDC42Q96M95 316 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 MTRQ99707 1265 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 RNF41Q9H4P4 317 aaPredicted RBP8.66□□□□□ -1.02
CHD8-209ENST00000555935 EPB41L4AQ9HCS5 686 aaPredicted RBP8.66□□□□□ -1.02
CHD8-209ENST00000555935 PRPF3O43395 683 aaKnown RBP8.66□□□□□ -1.02
CHD8-209ENST00000555935 GNAT2P19087 354 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 HNRNPH3P31942 346 aaKnown RBP8.66□□□□□ -1.02
CHD8-209ENST00000555935 MDH1P40925 334 aaKnown RBP8.66□□□□□ -1.02
CHD8-209ENST00000555935 ATP1A2P50993 1020 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 PTGDRQ13258 359 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 ZNF174Q15697 407 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 METTL24Q5JXM2 366 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 RNF187Q5TA31 235 aaPredicted RBP8.66□□□□□ -1.02
CHD8-209ENST00000555935 PPP4R3AQ6IN85 833 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 FAM114A1Q8IWE2 563 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 CCDC82Q8N4S0 544 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 CCT8L2Q96SF2 557 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 ISCA1Q9BUE6 129 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 NACAP1Q9BZK3 213 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 VEZTQ9HBM0 779 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 CD248Q9HCU0 757 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 INCENPQ9NQS7 918 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 GDF3Q9NR23 364 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 GDAQ9Y2T3 454 aa8.66□□□□□ -1.02
CHD8-209ENST00000555935 CSF1RP07333 972 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 ARID4AP29374 1257 aaPredicted RBP8.65□□□□□ -1.02
CHD8-209ENST00000555935 LONP1P36776 959 aaKnown RBP8.65□□□□□ -1.02
CHD8-209ENST00000555935 MRPL12P52815 198 aaKnown RBP8.65□□□□□ -1.02
CHD8-209ENST00000555935 SLC7A5Q01650 507 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 EARS2Q5JPH6 523 aaKnown RBP8.65□□□□□ -1.02
CHD8-209ENST00000555935 ARL6IP4Q66PJ3 421 aaKnown RBP8.65□□□□□ -1.02
CHD8-209ENST00000555935 C6orf89Q6UWU4 347 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 SH2D3CQ8N5H7 860 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 NUP133Q8WUM0 1156 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.65□□□□□ -1.02
CHD8-209ENST00000555935 TNFRSF25Q93038 417 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 ATP6V1G3Q96LB4 118 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 TRIM47Q96LD4 638 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 CCDC43Q96MW1 224 aaKnown RBP8.65□□□□□ -1.02
CHD8-209ENST00000555935 IFIH1Q9BYX4 1025 aaKnown RBP8.65□□□□□ -1.02
CHD8-209ENST00000555935 SLC40A1Q9NP59 571 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 AGPAT5Q9NUQ2 364 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 LRWD1Q9UFC0 647 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 ODF2LQ9ULJ1 636 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 DUSP10Q9Y6W6 482 aa8.65□□□□□ -1.02
CHD8-209ENST00000555935 ZNF233A6NK53 670 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 LCA5LO95447 670 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 KRT14P02533 472 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 PCCAP05165 728 aaPredicted RBP8.65□□□□□ -1.03
CHD8-209ENST00000555935 GCFC2P16383 781 aaKnown RBP8.65□□□□□ -1.03
CHD8-209ENST00000555935 ERCC3P19447 782 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 SATB1Q01826 763 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 PPARAQ07869 468 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 TBC1D8BQ0IIM8 1120 aa8.65□□□□□ -1.03
CHD8-209ENST00000555935 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms