RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 NBPF4Q96M43 638 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 ST7Q9NRC1 585 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 AP5S1Q9NUS5 200 aa6.27□□□□□ -1.41
SCFD1-214ENST00000554819 CGGBP1Q9UFW8 167 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-214ENST00000554819 SUSD5O60279 629 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 CD3EP07766 207 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 ERVFC1P60507 584 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 AMPD2Q01433 879 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 SNX17Q15036 470 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 SLC14A2Q15849 920 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 SV2CQ496J9 727 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 NAT16Q8N8M0 369 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 MICAL1Q8TDZ2 1067 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 SREK1Q8WXA9 508 aaKnown RBP6.26□□□□□ -1.41
SCFD1-214ENST00000554819 FAM168AQ92567 244 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 PPP1R14AQ96A00 147 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 FCRL3Q96P31 734 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-214ENST00000554819 G6PC3Q9BUM1 346 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 LRP2BPQ9P2M1 347 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 APEX2Q9UBZ4 518 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 EMC9Q9Y3B6 208 aa6.26□□□□□ -1.41
SCFD1-214ENST00000554819 B2RBV5 119 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 AGRPO00253 132 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 VAMP4O75379 141 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 GLI1P08151 1106 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 RBL2Q08999 1139 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 RTP2Q5QGT7 225 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 HLA-DQA1Q5Y7H0 255 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 CYP2R1Q6VVX0 501 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 ZPBP2Q6X784 338 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 CELF2-AS1Q8N7Q2 184 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 ZNF513Q8N8E2 541 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-214ENST00000554819 FAM53CQ9NYF3 392 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 EBF1Q9UH73 591 aa6.25□□□□□ -1.41
SCFD1-214ENST00000554819 A0A1W2PQ45 241 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-214ENST00000554819 A0A1W2PQY0 241 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 WTIPA6NIX2 430 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-214ENST00000554819 FADS2P1A8MWK0 482 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 TBC1D8O95759 1140 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 RTP1P59025 263 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 DPY19L1Q2PZI1 675 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 FYB2Q5VWT5 728 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 EEF1DP3Q658K8 133 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 MRM1Q6IN84 353 aaKnown RBP6.24□□□□□ -1.41
SCFD1-214ENST00000554819 RCSD1Q6JBY9 416 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 CEP128Q6ZU80 1094 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 HHIPL1Q96JK4 782 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 CWC22Q9HCG8 908 aaKnown RBP6.24□□□□□ -1.41
SCFD1-214ENST00000554819 ERVK13-1Q9NX77 482 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 SIRPGQ9P1W8 387 aa6.24□□□□□ -1.41
SCFD1-214ENST00000554819 AURKAO14965 403 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 FGF10O15520 208 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-214ENST00000554819 NRDCO43847 1150 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 USP2O75604 605 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-214ENST00000554819 KCNH1O95259 989 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 IFNGR1P15260 489 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 SEPHS1P49903 392 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 GALNT18Q6P9A2 607 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 TRIM59Q8IWR1 403 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 C19orf44Q9H6X5 657 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 SP110Q9HB58 689 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 GPR160Q9UJ42 338 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 BACE2Q9Y5Z0 518 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 CARMIL2Q6F5E8 1435 aa6.23□□□□□ -1.41
SCFD1-214ENST00000554819 IQCA1LA6NCM1 817 aa6.22□□□□□ -1.41
SCFD1-214ENST00000554819 C2orf71A6NGG8 1288 aa6.22□□□□□ -1.41
SCFD1-214ENST00000554819 TRHRP34981 398 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-214ENST00000554819 RBM10P98175 930 aaKnown RBP6.22□□□□□ -1.41
SCFD1-214ENST00000554819 LCE3BQ5TA77 95 aa6.22□□□□□ -1.41
SCFD1-214ENST00000554819 MPZL3Q6UWV2 235 aa6.22□□□□□ -1.41
SCFD1-214ENST00000554819 KSR1Q8IVT5 923 aa6.22□□□□□ -1.41
SCFD1-214ENST00000554819 ST13P5Q8NFI4 369 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-214ENST00000554819 MRGPRX3Q96LB0 322 aa6.22□□□□□ -1.41
SCFD1-214ENST00000554819 DRC1Q96MC2 740 aa6.22□□□□□ -1.41
SCFD1-214ENST00000554819 PTCHD1Q96NR3 888 aa6.22□□□□□ -1.41
SCFD1-214ENST00000554819 CYP26B1Q9NR63 512 aa6.22□□□□□ -1.41
SCFD1-214ENST00000554819 GPR55Q9Y2T6 319 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-214ENST00000554819 RNF114Q9Y508 228 aa6.22□□□□□ -1.41
SCFD1-214ENST00000554819 TRBV23OR9-2A0A075B6M9 112 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 A0A1W2PQ27 194 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 A0A1W2PQ64 194 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 A0A1W2PQC6 194 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 A0A1W2PQD8 194 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 STXBP3O00186 592 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 PSPNO60542 156 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 ITGAVP06756 1048 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 SLC10A6Q3KNW5 377 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 GTF2IRD2BQ6EKJ0 949 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 SLCO6A1Q86UG4 719 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 GTF2IRD2Q86UP8 949 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 JAMLQ86YT9 394 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 TMEM52Q8NDY8 209 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 ZNF669Q96BR6 464 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-214ENST00000554819 CCDC140Q96MF4 163 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 MCMBPQ9BTE3 642 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 CCDC113Q9H0I3 377 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 SLC6A17Q9H1V8 727 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 CRTAC1Q9NQ79 661 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 TAF6LQ9Y6J9 622 aa6.21□□□□□ -1.42
SCFD1-214ENST00000554819 ZNF503-AS2A6NEH8 195 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms