RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 CCDC82Q8N4S0 544 aa22.39■■□□□ 1.17
PSEN1-207ENST00000553599 REPS2Q8NFH8 660 aa22.39■■□□□ 1.17
PSEN1-207ENST00000553599 RBPJLQ9UBG7 517 aa22.39■■□□□ 1.17
PSEN1-207ENST00000553599 hCG_1984214I3L0E3 225 aa22.38■■□□□ 1.17
PSEN1-207ENST00000553599 ICAM1P05362 532 aa22.38■■□□□ 1.17
PSEN1-207ENST00000553599 COPB2P35606 906 aa22.38■■□□□ 1.17
PSEN1-207ENST00000553599 ST3GAL1Q11201 340 aa22.38■■□□□ 1.17
PSEN1-207ENST00000553599 FAM110CQ1W6H9 321 aa22.38■■□□□ 1.17
PSEN1-207ENST00000553599 ZNF713Q8N859 430 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-207ENST00000553599 PIGSQ96S52 555 aa22.38■■□□□ 1.17
PSEN1-207ENST00000553599 BEGAINQ9BUH8 593 aa22.38■■□□□ 1.17
PSEN1-207ENST00000553599 TEX13BQ9BXU2 312 aa22.38■■□□□ 1.17
PSEN1-207ENST00000553599 RNF186Q9NXI6 227 aa22.38■■□□□ 1.17
PSEN1-207ENST00000553599 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-207ENST00000553599 V9GY48 417 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-207ENST00000553599 ANP32AP39687 249 aaKnown RBP22.37■■□□□ 1.17
PSEN1-207ENST00000553599 CCNA1P78396 465 aa22.37■■□□□ 1.17
PSEN1-207ENST00000553599 HMGN5P82970 282 aaKnown RBP22.37■■□□□ 1.17
PSEN1-207ENST00000553599 TMEM132BQ14DG7 1078 aa22.37■■□□□ 1.17
PSEN1-207ENST00000553599 QRICH1Q2TAL8 776 aa22.37■■□□□ 1.17
PSEN1-207ENST00000553599 NSUN7Q8NE18 718 aaKnown RBP22.37■■□□□ 1.17
PSEN1-207ENST00000553599 GPRC5AQ8NFJ5 357 aa22.37■■□□□ 1.17
PSEN1-207ENST00000553599 WASF1Q92558 559 aa22.37■■□□□ 1.17
PSEN1-207ENST00000553599 INTS4Q96HW7 963 aaKnown RBP22.37■■□□□ 1.17
PSEN1-207ENST00000553599 AMNQ9BXJ7 453 aa22.37■■□□□ 1.17
PSEN1-207ENST00000553599 SLC26A6Q9BXS9 759 aa22.37■■□□□ 1.17
PSEN1-207ENST00000553599 ZNF214Q9UL59 606 aaPredicted RBP22.37■■□□□ 1.17
PSEN1-207ENST00000553599 DEXIO95424 95 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 CTDNEP1O95476 244 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 SLC25A27O95847 323 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 BCRP11274 1271 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 STAT3P40763 770 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 ERVK-9P63128 1117 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 ERVK-24P63145 666 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 TKFCQ3LXA3 575 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 POTEEQ6S8J3 1075 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 C17orf99Q6UX52 265 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 FBXO11Q86XK2 927 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 HOMER1Q86YM7 354 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 FAM177A1Q8N128 213 aaPredicted RBP22.36■■□□□ 1.17
PSEN1-207ENST00000553599 SMARCC2Q8TAQ2 1214 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 PHKBQ93100 1093 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 SPATC1LQ9H0A9 340 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 TSHZ2Q9NRE2 1034 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 BTBD7Q9P203 1132 aa22.36■■□□□ 1.17
PSEN1-207ENST00000553599 ZNF536O15090 1300 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 PTPDC1A2A3K4 754 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 TRPA1O75762 1119 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 CNMDO75829 334 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 PFKFB3Q16875 520 aaPredicted RBP22.35■■□□□ 1.17
PSEN1-207ENST00000553599 NOM1Q5C9Z4 860 aaKnown RBP22.35■■□□□ 1.17
PSEN1-207ENST00000553599 CCDC174Q6PII3 467 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 RIOX2Q8IUF8 465 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 ANKRD13CQ8N6S4 541 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 SHCBP1Q8NEM2 672 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 PAGR1Q9BTK6 254 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 TXNRD2Q9NNW7 524 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 KIF3AQ9Y496 699 aa22.35■■□□□ 1.17
PSEN1-207ENST00000553599 COL11A1P12107 1806 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-207ENST00000553599 SCG2P13521 617 aa22.34■■□□□ 1.17
PSEN1-207ENST00000553599 CPXCR1Q8N123 301 aa22.34■■□□□ 1.17
PSEN1-207ENST00000553599 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
PSEN1-207ENST00000553599 MAF1Q9H063 256 aa22.34■■□□□ 1.17
PSEN1-207ENST00000553599 RAVER2Q9HCJ3 691 aaKnown RBP22.34■■□□□ 1.17
PSEN1-207ENST00000553599 WBP1LQ9NX94 342 aa22.34■■□□□ 1.17
PSEN1-207ENST00000553599 ORC3Q9UBD5 711 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-207ENST00000553599 CCPG1Q9ULG6 757 aa22.34■■□□□ 1.17
PSEN1-207ENST00000553599 BAZ2BQ9UIF8 2168 aaKnown RBP22.33■■□□□ 1.17
PSEN1-207ENST00000553599 ABCB11O95342 1321 aa22.33■■□□□ 1.17
PSEN1-207ENST00000553599 PLS1Q14651 629 aa22.33■■□□□ 1.17
PSEN1-207ENST00000553599 SNRNP48Q6IEG0 339 aaKnown RBP22.33■■□□□ 1.17
PSEN1-207ENST00000553599 TEX2Q8IWB9 1127 aa22.33■■□□□ 1.17
PSEN1-207ENST00000553599 CCDC12Q8WUD4 166 aaPredicted RBP22.33■■□□□ 1.17
PSEN1-207ENST00000553599 FBXO40Q9UH90 709 aa22.33■■□□□ 1.17
PSEN1-207ENST00000553599 CPA4Q9UI42 421 aa22.33■■□□□ 1.17
PSEN1-207ENST00000553599 PCDHA1Q9Y5I3 950 aa22.33■■□□□ 1.17
PSEN1-207ENST00000553599 MYH6P13533 1939 aa22.32■■□□□ 1.16
PSEN1-207ENST00000553599 SNAP25P60880 206 aa22.32■■□□□ 1.16
PSEN1-207ENST00000553599 PKN1Q16512 942 aa22.32■■□□□ 1.16
PSEN1-207ENST00000553599 PPP1R18Q6NYC8 613 aa22.32■■□□□ 1.16
PSEN1-207ENST00000553599 CHST13Q8NET6 341 aa22.32■■□□□ 1.16
PSEN1-207ENST00000553599 PIBF1Q8WXW3 757 aa22.32■■□□□ 1.16
PSEN1-207ENST00000553599 AGBL1Q96MI9 1066 aa22.32■■□□□ 1.16
PSEN1-207ENST00000553599 MROH8Q9H579 483 aa22.32■■□□□ 1.16
PSEN1-207ENST00000553599 SH3GLB2Q9NR46 395 aa22.32■■□□□ 1.16
PSEN1-207ENST00000553599 MRPL11Q9Y3B7 192 aaKnown RBP22.32■■□□□ 1.16
PSEN1-207ENST00000553599 PPP1R11O60927 126 aaPredicted RBP22.31■■□□□ 1.16
PSEN1-207ENST00000553599 XBP1P17861 261 aa22.31■■□□□ 1.16
PSEN1-207ENST00000553599 Q3C1V9 767 aa22.31■■□□□ 1.16
PSEN1-207ENST00000553599 MOV10L1Q9BXT6 1211 aaKnown RBP22.31■■□□□ 1.16
PSEN1-207ENST00000553599 BARHL2Q9NY43 387 aa22.31■■□□□ 1.16
PSEN1-207ENST00000553599 SMC3Q9UQE7 1217 aa22.31■■□□□ 1.16
PSEN1-207ENST00000553599 RBM19Q9Y4C8 960 aaKnown RBP22.31■■□□□ 1.16
PSEN1-207ENST00000553599 hCG_1642624A0A1W2PR95 340 aa22.3■■□□□ 1.16
PSEN1-207ENST00000553599 JAK2O60674 1132 aa22.3■■□□□ 1.16
PSEN1-207ENST00000553599 TBC1D8O95759 1140 aa22.3■■□□□ 1.16
PSEN1-207ENST00000553599 HSP90AA1P07900 732 aaKnown RBP22.3■■□□□ 1.16
PSEN1-207ENST00000553599 FDPSP14324 419 aaKnown RBP22.3■■□□□ 1.16
PSEN1-207ENST00000553599 MAPK4P31152 587 aa22.3■■□□□ 1.16
PSEN1-207ENST00000553599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms