RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 SUSD2Q9UGT4 822 aa10.52□□□□□ -0.73
PCNX1-205ENST00000553508 A0A087WZG4 1122 aa10.51□□□□□ -0.73
PCNX1-205ENST00000553508 NOTOA8MTQ0 251 aa10.51□□□□□ -0.73
PCNX1-205ENST00000553508 B2RBV5 119 aa10.51□□□□□ -0.73
PCNX1-205ENST00000553508 DDAH1O94760 285 aa10.51□□□□□ -0.73
PCNX1-205ENST00000553508 EFEMP2O95967 443 aa10.51□□□□□ -0.73
PCNX1-205ENST00000553508 IFNGR1P15260 489 aa10.51□□□□□ -0.73
PCNX1-205ENST00000553508 ZC3H6P61129 1189 aaKnown RBP10.51□□□□□ -0.73
PCNX1-205ENST00000553508 TNFRSF10DQ9UBN6 386 aa10.51□□□□□ -0.73
PCNX1-205ENST00000553508 ANKRD34BA5PLL1 514 aa10.5□□□□□ -0.73
PCNX1-205ENST00000553508 FADS2P1A8MWK0 482 aa10.5□□□□□ -0.73
PCNX1-205ENST00000553508 ENDOUP21128 410 aaKnown RBP10.5□□□□□ -0.73
PCNX1-205ENST00000553508 KIR3DS1Q14943 382 aa10.5□□□□□ -0.73
PCNX1-205ENST00000553508 APBA2Q99767 749 aa10.5□□□□□ -0.73
PCNX1-205ENST00000553508 APEX2Q9UBZ4 518 aa10.5□□□□□ -0.73
PCNX1-205ENST00000553508 R3HCC1Q9Y3T6 440 aaKnown RBP10.5□□□□□ -0.73
PCNX1-205ENST00000553508 FARP2O94887 1054 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-205ENST00000553508 NCAPHQ15003 741 aa10.49□□□□□ -0.73
PCNX1-205ENST00000553508 FAM178BQ8IXR5 827 aa10.49□□□□□ -0.73
PCNX1-205ENST00000553508 TMEM52Q8NDY8 209 aa10.49□□□□□ -0.73
PCNX1-205ENST00000553508 HNRNPLLQ8WVV9 542 aaKnown RBP10.49□□□□□ -0.73
PCNX1-205ENST00000553508 GMLQ99445 158 aa10.49□□□□□ -0.73
PCNX1-205ENST00000553508 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
PCNX1-205ENST00000553508 CGGBP1Q9UFW8 167 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-205ENST00000553508 NRDCO43847 1150 aa10.48□□□□□ -0.73
PCNX1-205ENST00000553508 PDE6BP35913 854 aa10.48□□□□□ -0.73
PCNX1-205ENST00000553508 POU5F2Q8N7G0 328 aa10.48□□□□□ -0.73
PCNX1-205ENST00000553508 MICAL1Q8TDZ2 1067 aa10.48□□□□□ -0.73
PCNX1-205ENST00000553508 SHISA4Q96DD7 197 aa10.48□□□□□ -0.73
PCNX1-205ENST00000553508 PLCD4Q9BRC7 762 aa10.48□□□□□ -0.73
PCNX1-205ENST00000553508 MCMBPQ9BTE3 642 aa10.48□□□□□ -0.73
PCNX1-205ENST00000553508 LGR4Q9BXB1 951 aa10.48□□□□□ -0.73
PCNX1-205ENST00000553508 ST7Q9NRC1 585 aa10.48□□□□□ -0.73
PCNX1-205ENST00000553508 AKT3Q9Y243 479 aa10.48□□□□□ -0.73
PCNX1-205ENST00000553508 YBX2Q9Y2T7 364 aaKnown RBP10.48□□□□□ -0.73
PCNX1-205ENST00000553508 STXBP3O00186 592 aa10.47□□□□□ -0.73
PCNX1-205ENST00000553508 SNX17Q15036 470 aa10.47□□□□□ -0.73
PCNX1-205ENST00000553508 HSF5Q4G112 596 aaPredicted RBP10.47□□□□□ -0.73
PCNX1-205ENST00000553508 ANKS3Q6ZW76 656 aa10.47□□□□□ -0.73
PCNX1-205ENST00000553508 NLRX1Q86UT6 975 aa10.47□□□□□ -0.73
PCNX1-205ENST00000553508 ARHGEF39Q8N4T4 335 aa10.47□□□□□ -0.73
PCNX1-205ENST00000553508 INTS4Q96HW7 963 aaKnown RBP10.47□□□□□ -0.73
PCNX1-205ENST00000553508 DCP1AQ9NPI6 582 aaPredicted RBP10.47□□□□□ -0.73
PCNX1-205ENST00000553508 AMPD2Q01433 879 aa10.46□□□□□ -0.73
PCNX1-205ENST00000553508 FXNQ16595 210 aa10.46□□□□□ -0.73
PCNX1-205ENST00000553508 SLC6A17Q9H1V8 727 aa10.46□□□□□ -0.73
PCNX1-205ENST00000553508 TAF6LQ9Y6J9 622 aa10.46□□□□□ -0.73
PCNX1-205ENST00000553508 FGF10O15520 208 aaPredicted RBP10.45□□□□□ -0.74
PCNX1-205ENST00000553508 KCNH1O95259 989 aa10.45□□□□□ -0.74
PCNX1-205ENST00000553508 NAT2P11245 290 aa10.45□□□□□ -0.74
PCNX1-205ENST00000553508 SDHBP21912 280 aa10.45□□□□□ -0.74
PCNX1-205ENST00000553508 CEBPAP49715 358 aaPredicted RBP10.45□□□□□ -0.74
PCNX1-205ENST00000553508 GALNT18Q6P9A2 607 aa10.45□□□□□ -0.74
PCNX1-205ENST00000553508 SLCO6A1Q86UG4 719 aa10.45□□□□□ -0.74
PCNX1-205ENST00000553508 KSR1Q8IVT5 923 aa10.45□□□□□ -0.74
PCNX1-205ENST00000553508 ZNF513Q8N8E2 541 aaPredicted RBP10.45□□□□□ -0.74
PCNX1-205ENST00000553508 RCC1LQ96I51 464 aaKnown RBP10.45□□□□□ -0.74
PCNX1-205ENST00000553508 JMJD8Q96S16 334 aa10.45□□□□□ -0.74
PCNX1-205ENST00000553508 EPB41L4BQ9H329 900 aa10.45□□□□□ -0.74
PCNX1-205ENST00000553508 WTIPA6NIX2 430 aaPredicted RBP10.44□□□□□ -0.74
PCNX1-205ENST00000553508 PRKCAP17252 672 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 MESP2Q0VG99 397 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 ZNF124Q15973 351 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 SV2CQ496J9 727 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 ADGRF1Q5T601 910 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 HLA-DQA1Q5Y7H0 255 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 JAMLQ86YT9 394 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 NUP43Q8NFH3 380 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 FAM84AQ96KN4 292 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 PTCHD1Q96NR3 888 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 SLC38A3Q99624 504 aa10.44□□□□□ -0.74
PCNX1-205ENST00000553508 A0A1W2PQ27 194 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 A0A1W2PQ45 241 aaPredicted RBP10.43□□□□□ -0.74
PCNX1-205ENST00000553508 A0A1W2PQ64 194 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 A0A1W2PQC6 194 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 A0A1W2PQD8 194 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 A0A1W2PQY0 241 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 NOP56O00567 594 aaKnown RBP10.43□□□□□ -0.74
PCNX1-205ENST00000553508 GJB6O95452 261 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 ZNF605Q86T29 641 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 BVESQ8NE79 360 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 KRTAP9-2Q9BYQ4 174 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 LRP2BPQ9P2M1 347 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 IMPACTQ9P2X3 320 aa10.43□□□□□ -0.74
PCNX1-205ENST00000553508 PPP1R1BQ9UD71 204 aaPredicted RBP10.43□□□□□ -0.74
PCNX1-205ENST00000553508 C2orf71A6NGG8 1288 aa10.42□□□□□ -0.74
PCNX1-205ENST00000553508 AURKAO14965 403 aa10.42□□□□□ -0.74
PCNX1-205ENST00000553508 C8AP07357 584 aa10.42□□□□□ -0.74
PCNX1-205ENST00000553508 SEPHS1P49903 392 aa10.42□□□□□ -0.74
PCNX1-205ENST00000553508 MRM1Q6IN84 353 aaKnown RBP10.42□□□□□ -0.74
PCNX1-205ENST00000553508 SYDE1Q6ZW31 735 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-205ENST00000553508 CELF2-AS1Q8N7Q2 184 aa10.42□□□□□ -0.74
PCNX1-205ENST00000553508 FBXO15Q8NCQ5 510 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-205ENST00000553508 TANGO6Q9C0B7 1094 aa10.42□□□□□ -0.74
PCNX1-205ENST00000553508 EMC9Q9Y3B6 208 aa10.42□□□□□ -0.74
PCNX1-205ENST00000553508 SUSD5O60279 629 aa10.41□□□□□ -0.74
PCNX1-205ENST00000553508 ZNF143P52747 638 aaPredicted RBP10.41□□□□□ -0.74
PCNX1-205ENST00000553508 GRB10Q13322 594 aa10.41□□□□□ -0.74
PCNX1-205ENST00000553508 IRF2BP1Q8IU81 584 aa10.41□□□□□ -0.74
PCNX1-205ENST00000553508 BACE2Q9Y5Z0 518 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms