RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 KRT26Q7Z3Y9 468 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 ZNF713Q8N859 430 aaPredicted RBP12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 DAGLBQ8NCG7 672 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 MRPS27Q92552 414 aaKnown RBP12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 KIFC2Q96AC6 838 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 PRR12Q9ULL5 1215 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 PCDHA1Q9Y5I3 950 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 PPP2R3BQ9Y5P8 575 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 PITPNM2Q9BZ72 1349 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 SMCHD1A6NHR9 2005 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 ADCY7P51828 1080 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 GRIN1Q05586 938 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 SCYL3Q8IZE3 742 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 PICK1Q9NRD5 415 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 FBXO28Q9NVF7 368 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 CEP131Q9UPN4 1083 aa12.63□□□□□ -0.39
SLC38A1-210ENST00000552197 NDUFA8P51970 172 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 ZNF445P59923 1031 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 SPP2Q13103 211 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 MTMR2Q13614 643 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 UBE2SQ16763 222 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 REXO1Q8N1G1 1221 aaKnown RBP12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 KLRG1Q96E93 195 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 L3MBTL3Q96JM7 780 aaPredicted RBP12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 NUP62CLQ9H1M0 184 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 ZNF112Q9UJU3 913 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 SSC5DA1L4H1 1573 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 A0A1W2PQ27 194 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 A0A1W2PQ64 194 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 A0A1W2PQD8 194 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 SNW1Q13573 536 aaKnown RBP12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 CCDC174Q6PII3 467 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 ZHX2Q9Y6X8 837 aa12.62□□□□□ -0.39
SLC38A1-210ENST00000552197 DOCK1Q14185 1865 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 ESYT2A0FGR8 921 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 FAM160A1Q05DH4 1040 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 PTGDRQ13258 359 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 SHC4Q6S5L8 630 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 USP50Q70EL3 339 aaPredicted RBP12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 FBXO11Q86XK2 927 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 CKAP2LQ8IYA6 745 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 AMNQ9BXJ7 453 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 TNMDQ9H2S6 317 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 PSTPIP2Q9H939 334 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 DDX19AQ9NUU7 478 aaKnown RBP12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 USP2O75604 605 aaPredicted RBP12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 PTPRAP18433 802 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 TRAPPC10P48553 1259 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 NONOQ15233 471 aaKnown RBP eCLIP12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 LRSAM1Q6UWE0 723 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 CHURC1Q8WUH1 139 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 CUL5Q93034 780 aa12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 FBXO2Q9UK22 296 aaPredicted RBP12.61□□□□□ -0.39
SLC38A1-210ENST00000552197 USP17L15C9J2P7 530 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 USP17L13C9JLJ4 530 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 USP17L11C9JVI0 530 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 USP17L18D6R9N7 530 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 USP17L22D6RA61 530 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 USP17L17D6RBQ6 530 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 USP17L19D6RCP7 530 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 USP17L20D6RJB6 530 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 CUTAO60888 179 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 PFKFB1P16118 471 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 CMA1P23946 247 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 USP17L24Q0WX57 530 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 LETM2Q2VYF4 491 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 USP17L6PQ6QN14 398 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 KRT25Q7Z3Z0 450 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 ENGASEQ8NFI3 743 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 TBCKQ8TEA7 893 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 KIAA1683Q9H0B3 1180 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 RIC8AQ9NPQ8 531 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 GINM1Q9NU53 330 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 KINO60870 393 aaKnown RBP12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 PTPREP23469 700 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 MRPL12P52815 198 aaKnown RBP12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 PPP1R18Q6NYC8 613 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 FMR1NBQ8N0W7 255 aaPredicted RBP12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 TANGO6Q9C0B7 1094 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 SRPRBQ9Y5M8 271 aaKnown RBP12.6□□□□□ -0.39
SLC38A1-210ENST00000552197 CCNT1O60563 726 aaKnown RBP12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 LETM1O95202 739 aaPredicted RBP12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 ZNF280CQ8ND82 737 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 CSRNP2Q9H175 543 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 AS3MTQ9HBK9 375 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 FEM1BQ9UK73 627 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 FSD2A1L4K1 749 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 VWA3AA6NCI4 1184 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 POTECB2RU33 542 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 PPP1R12BO60237 982 aaPredicted RBP12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
SLC38A1-210ENST00000552197 RESP18Q5W5W9 173 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms