RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 FAM102BQ5T8I3 360 aa11.37□□□□□ -0.59
PCDH9-204ENST00000544246 PACSIN2Q9UNF0 486 aaPredicted RBP11.37□□□□□ -0.59
PCDH9-204ENST00000544246 TTI1O43156 1089 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 LIG3P49916 1009 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 YWHAGP61981 247 aaKnown RBP eCLIP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 FBXL13Q8NEE6 735 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 ANKRD36BQ8N2N9 1353 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 INHBAP08476 426 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 IFRD2Q12894 506 aaPredicted RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 USH1GQ495M9 461 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 NLRX1Q86UT6 975 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 FAM186BQ8IYM0 893 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 FAM193BQ96PV7 902 aaPredicted RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 MMS19Q96T76 1030 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 SLC13A4Q9UKG4 626 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 PASKQ96RG2 1323 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 A6NJR5 290 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 EIF3CLB5ME19 914 aaKnown RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 HEXIM1O94992 359 aaKnown RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 EEF1GP26641 437 aaKnown RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 APBA1Q02410 837 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 SLC12A1Q13621 1099 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 EIF3CQ99613 913 aaKnown RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 OLA1Q9NTK5 396 aaKnown RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 STK32BQ9NY57 414 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 RTEL1Q9NZ71 1219 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 TRPC5Q9UL62 973 aaPredicted RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 NFE2L3Q9Y4A8 694 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 ACEP12821 1306 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 ZNF202O95125 648 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 PDE1BQ01064 536 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 EP400NLQ6ZTU2 488 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 BBS5Q8N3I7 341 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 NT5C3AQ9H0P0 336 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 C14orf93Q9H972 538 aaKnown RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 NLRC4Q9NPP4 1024 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 MYLK4Q86YV6 388 aaPredicted RBP11.36□□□□□ -0.59
PCDH9-204ENST00000544246 CERS3Q8IU89 383 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 ZBTB8OSQ8IWT0 167 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 KIFC3Q9BVG8 833 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 NBPF3Q9H094 633 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 ARMT1Q9H993 441 aa11.36□□□□□ -0.59
PCDH9-204ENST00000544246 E9PMD0 336 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 LMNB2Q03252 620 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 CCDC197Q8NCU1 140 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 C1orf112Q9NSG2 853 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 TFCP2L1Q9NZI6 479 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.35□□□□□ -0.59
PCDH9-204ENST00000544246 MAP3K7O43318 606 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 XRCC5P13010 732 aaKnown RBP11.35□□□□□ -0.59
PCDH9-204ENST00000544246 DIS3L2Q8IYB7 885 aaKnown RBP11.35□□□□□ -0.59
PCDH9-204ENST00000544246 TRIM15Q9C019 465 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 BLZF1Q9H2G9 400 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 HESX1Q9UBX0 185 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 SCOCQ9UIL1 159 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 TMEM2Q9UHN6 1383 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 H7C0C1 242 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 ATP5OP48047 213 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 CYP2J2P51589 502 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 TPCN1Q9ULQ1 816 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 CHMLP26374 656 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 LIG4P49917 911 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 LRRC23Q53EV4 343 aaPredicted RBP11.35□□□□□ -0.59
PCDH9-204ENST00000544246 PPP4R4Q6NUP7 873 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 RFX6Q8HWS3 928 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 TPH2Q8IWU9 490 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 RDH13Q8NBN7 331 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 SPZ1Q9BXG8 430 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 KDRP35968 1356 aa11.35□□□□□ -0.59
PCDH9-204ENST00000544246 UFL1O94874 794 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 SLC39A6Q13433 755 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 ZBTB41Q5SVQ8 909 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 KRT80Q6KB66 452 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 METTL13Q8N6R0 699 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 PGBD1Q96JS3 809 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 PCDHB13Q9Y5F0 798 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 TYW5A2RUC4 315 aaKnown RBP11.34□□□□□ -0.59
PCDH9-204ENST00000544246 ARHGEF9O43307 516 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 BUB1O43683 1085 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 KPNA2P52292 529 aaKnown RBP11.34□□□□□ -0.59
PCDH9-204ENST00000544246 PUM3Q15397 648 aaKnown RBP11.34□□□□□ -0.59
PCDH9-204ENST00000544246 KAZNQ674X7 775 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 KSR1Q8IVT5 923 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 GOLGA5Q8TBA6 731 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 BCAS4Q8TDM0 211 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 NEUROG2Q9H2A3 272 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 CFAP65Q6ZU64 1925 aaKnown RBP11.34□□□□□ -0.59
PCDH9-204ENST00000544246 FAM170AA1A519 330 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 TBCCQ15814 346 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 NUDCD3Q8IVD9 361 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 SCYL3Q8IZE3 742 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 TAB3Q8N5C8 712 aaPredicted RBP11.34□□□□□ -0.59
PCDH9-204ENST00000544246 PAWRQ96IZ0 340 aaKnown RBP11.34□□□□□ -0.59
PCDH9-204ENST00000544246 BEGAINQ9BUH8 593 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 KIF9Q9HAQ2 790 aa11.34□□□□□ -0.59
PCDH9-204ENST00000544246 ANGPTL2Q9UKU9 493 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms