RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 PSMD7P51665 324 aa21.11■□□□□ 0.97
HDAC4-215ENST00000543185 EPN1Q9Y6I3 576 aaPredicted RBP21.11■□□□□ 0.97
HDAC4-215ENST00000543185 BRD1O95696 1058 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.1■□□□□ 0.97
HDAC4-215ENST00000543185 ABTB1Q969K4 478 aaPredicted RBP21.1■□□□□ 0.97
HDAC4-215ENST00000543185 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.1■□□□□ 0.97
HDAC4-215ENST00000543185 ARHGAP10A1A4S6 786 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 PGRMC1O00264 195 aaKnown RBP21.1■□□□□ 0.97
HDAC4-215ENST00000543185 PICALMQ13492 652 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 OTUD6AQ7L8S5 288 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 KLHL29Q96CT2 875 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 C14orf93Q9H972 538 aaKnown RBP21.1■□□□□ 0.97
HDAC4-215ENST00000543185 ADCY2Q08462 1091 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 PRPSAP1Q14558 356 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 PBKQ96KB5 322 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 MCF2P10911 925 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 EEF1B2P24534 225 aaKnown RBP21.1■□□□□ 0.97
HDAC4-215ENST00000543185 ATG16L1Q676U5 607 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 MID2Q9UJV3 735 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 GUCY2CP25092 1073 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 KMT5BQ4FZB7 885 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 TTC25Q96NG3 672 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 USTQ9Y2C2 406 aa21.1■□□□□ 0.97
HDAC4-215ENST00000543185 A0A1B0GW55 424 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 DUX4L2P0CJ85 424 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 DUX4L3P0CJ86 424 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 DUX4L4P0CJ87 422 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 DUX4L5P0CJ88 424 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 DUX4L6P0CJ89 424 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 DUX4L7P0CJ90 424 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 NEK2P51955 445 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 OCA2Q04671 838 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 NOSTRINQ8IVI9 506 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 DSCC1Q9BVC3 393 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 BICC1Q9H694 974 aaKnown RBP21.09■□□□□ 0.97
HDAC4-215ENST00000543185 DUX4Q9UBX2 424 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 FANCAO15360 1455 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 TFCP2Q12800 502 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 SLFNL1Q499Z3 407 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 MYOCDQ8IZQ8 938 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 AOC3Q16853 763 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 MAP7D3Q8IWC1 876 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 DIS3L2Q8IYB7 885 aaKnown RBP21.09■□□□□ 0.97
HDAC4-215ENST00000543185 LCMT1Q9UIC8 334 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 ZNF274Q96GC6 653 aaPredicted RBP21.09■□□□□ 0.97
HDAC4-215ENST00000543185 PLIN2Q99541 437 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 GNGT2O14610 69 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 ATF7P17544 494 aaPredicted RBP21.09■□□□□ 0.97
HDAC4-215ENST00000543185 SCYL1Q96KG9 808 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 EYA3Q99504 573 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 PNOCQ13519 176 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 CCPG1Q9ULG6 757 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 ZBTB21Q9ULJ3 1066 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 CFAP74Q9C0B2 1584 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 TRIM60Q495X7 471 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 ABCC2Q92887 1545 aa21.09■□□□□ 0.97
HDAC4-215ENST00000543185 NR1D1P20393 614 aa21.08■□□□□ 0.97
HDAC4-215ENST00000543185 WDR7Q9Y4E6 1490 aa21.08■□□□□ 0.97
HDAC4-215ENST00000543185 NOP56O00567 594 aaKnown RBP21.08■□□□□ 0.97
HDAC4-215ENST00000543185 ECE1P42892 770 aa21.08■□□□□ 0.97
HDAC4-215ENST00000543185 PPP2R5AQ15172 486 aa21.08■□□□□ 0.97
HDAC4-215ENST00000543185 TADA2BQ86TJ2 420 aa21.08■□□□□ 0.97
HDAC4-215ENST00000543185 FMO2Q99518 471 aa21.08■□□□□ 0.97
HDAC4-215ENST00000543185 PYGLP06737 847 aa21.08■□□□□ 0.97
HDAC4-215ENST00000543185 GLE1Q53GS7 698 aaKnown RBP21.08■□□□□ 0.97
HDAC4-215ENST00000543185 PLCH2O75038 1416 aa21.08■□□□□ 0.97
HDAC4-215ENST00000543185 FRMD3A2A2Y4 597 aa21.08■□□□□ 0.96
HDAC4-215ENST00000543185 NR1I2O75469 434 aa21.08■□□□□ 0.96
HDAC4-215ENST00000543185 COPS6Q7L5N1 327 aa21.08■□□□□ 0.96
HDAC4-215ENST00000543185 CHUKO15111 745 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 CMA1P23946 247 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 DMP1Q13316 513 aaPredicted RBP21.07■□□□□ 0.96
HDAC4-215ENST00000543185 WAPLQ7Z5K2 1190 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 NPATQ14207 1427 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 PCP11498 1178 aaKnown RBP21.07■□□□□ 0.96
HDAC4-215ENST00000543185 VPS41P49754 854 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 TRAIPQ9BWF2 469 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 PYGBP11216 843 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 MAPK8IP1Q9UQF2 711 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 A0A1W2PQ27 194 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 A0A1W2PQ64 194 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 A0A1W2PQD8 194 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 SPATA1Q5VX52 437 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 NDE1Q9NXR1 346 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 STOML1Q9UBI4 398 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 HDAC11Q96DB2 347 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 IKBKBO14920 756 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 HDAC4P56524 1084 aa21.07■□□□□ 0.96
HDAC4-215ENST00000543185 PIP4K2CQ8TBX8 421 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 U2AF1L4Q8WU68 220 aaKnown RBP21.06■□□□□ 0.96
HDAC4-215ENST00000543185 SNX14Q9Y5W7 946 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 ZC3H18Q86VM9 953 aaKnown RBP21.06■□□□□ 0.96
HDAC4-215ENST00000543185 MYH6P13533 1939 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 TEDDM1Q5T9Z0 273 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 PROCA1Q8NCQ7 364 aaPredicted RBP21.06■□□□□ 0.96
HDAC4-215ENST00000543185 TEX12Q9BXU0 123 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 TMEM60Q9H2L4 133 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 GPC4O75487 556 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 ACTN1P12814 892 aa21.06■□□□□ 0.96
HDAC4-215ENST00000543185 RTEL1Q9NZ71 1219 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms