RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 RPS6KA4O75676 772 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 EIF3JO75822 258 aaKnown RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 ERCC5P28715 1186 aaPredicted RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 CXCR5P32302 372 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 USP8P40818 1118 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 SLC1A4P43007 532 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 UBXN2AP68543 259 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 PFKFB3Q16875 520 aaPredicted RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 TXNRD1Q16881 649 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 LEKR1Q6ZMV7 388 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 RRAGAQ7L523 313 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 NEK8Q86SG6 692 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 RBM17Q96I25 401 aaKnown RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 TUBGCP2Q9BSJ2 902 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 PHF20Q9BVI0 1012 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 CHD2O14647 1828 aaKnown RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 KRT86O43790 486 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 FCER1AP12319 257 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 OAS2P29728 719 aaKnown RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 PKN1Q16512 942 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 TBC1D10BQ4KMP7 808 aaPredicted RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 FNBP4Q8N3X1 1017 aaPredicted RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 TC2NQ8N9U0 490 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 RGS22Q8NE09 1264 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 ZNF512BQ96KM6 892 aaPredicted RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 SPAG5Q96R06 1193 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 PYM1Q9BRP8 204 aaKnown RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 ACBD3Q9H3P7 528 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 ADCY7P51828 1080 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 PRPF4BQ13523 1007 aaKnown RBP11.05□□□□□ -0.64
PHC1-208ENST00000540574 OR8K1Q8NGG5 319 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 SAMM50Q9Y512 469 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 EPN1Q9Y6I3 576 aaPredicted RBP11.05□□□□□ -0.64
PHC1-208ENST00000540574 XDHP47989 1333 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 BUB1O43683 1085 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 GDF11O95390 407 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 RAPGEF1Q13905 1077 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 SEC23AQ15436 765 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 RAD9BQ6WBX8 426 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 TMTC1Q8IUR5 882 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 JAKMIP2Q96AA8 810 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 CD209Q9NNX6 404 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 DISC1Q9NRI5 854 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 HDAC6Q9UBN7 1215 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 SLIT3O75094 1523 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 MEIS1O00470 390 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 SMCR8Q8TEV9 937 aaPredicted RBP11.05□□□□□ -0.64
PHC1-208ENST00000540574 CNOT6LQ96LI5 555 aaKnown RBP11.05□□□□□ -0.64
PHC1-208ENST00000540574 BPIFA3Q9BQP9 254 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 PARD6BQ9BYG5 372 aa11.05□□□□□ -0.64
PHC1-208ENST00000540574 DDX39AO00148 427 aaKnown RBP11.04□□□□□ -0.64
PHC1-208ENST00000540574 PLCG2P16885 1265 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 GPSM2P81274 684 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 KRT25Q7Z3Z0 450 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 FAM205AQ6ZU69 1335 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 ZFYVE27Q5T4F4 411 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 POTEDQ86YR6 584 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 FAM114A1Q8IWE2 563 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 CEP112Q8N8E3 955 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 RDH13Q8NBN7 331 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 CNTNAP5Q8WYK1 1306 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 USP17L15C9J2P7 530 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 USP17L13C9JLJ4 530 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 USP17L11C9JVI0 530 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 USP17L18D6R9N7 530 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 USP17L22D6RA61 530 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 USP17L17D6RBQ6 530 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 USP17L19D6RCP7 530 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 USP17L20D6RJB6 530 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 LONP1P36776 959 aaKnown RBP11.04□□□□□ -0.64
PHC1-208ENST00000540574 USP17L24Q0WX57 530 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 GRAPQ13588 217 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 HLTFQ14527 1009 aaKnown RBP eCLIP11.04□□□□□ -0.64
PHC1-208ENST00000540574 TTBK2Q6IQ55 1244 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 USP17L6PQ6QN14 398 aa11.04□□□□□ -0.64
PHC1-208ENST00000540574 GRAPLQ8TC17 118 aaPredicted RBP11.04□□□□□ -0.64
PHC1-208ENST00000540574 SCAF8Q9UPN6 1271 aaKnown RBP11.04□□□□□ -0.64
PHC1-208ENST00000540574 JCADQ9P266 1359 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 MFAP3LO75121 409 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 TDP2O95551 362 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 PAFAH1B1P43034 410 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 KLK7P49862 253 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 SP4Q02446 784 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 SMC1AQ14683 1233 aaKnown RBP11.03□□□□□ -0.64
PHC1-208ENST00000540574 SF3B3Q15393 1217 aaKnown RBP11.03□□□□□ -0.64
PHC1-208ENST00000540574 TCP11X2Q5H9J9 407 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 ZNF658Q5TYW1 1059 aaPredicted RBP11.03□□□□□ -0.64
PHC1-208ENST00000540574 C12orf60Q5U649 245 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 IFT81Q8WYA0 676 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 TTC26A0AVF1 554 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 BICDL2A1A5D9 508 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 SPDYE3A6NKU9 549 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 ADAMTS3O15072 1205 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 CFBP00751 764 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 ATP2C1P98194 919 aaPredicted RBP11.03□□□□□ -0.64
PHC1-208ENST00000540574 PRR16Q569H4 304 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 CEP89Q96ST8 783 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 FAM107BQ9H098 131 aa11.03□□□□□ -0.64
PHC1-208ENST00000540574 PCDHA12Q9UN75 941 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms