RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
CMTM1-218ENST00000533915 TMEM132BQ14DG7 1078 aa16.32■□□□□ 0.2
CMTM1-218ENST00000533915 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
CMTM1-218ENST00000533915 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
CMTM1-218ENST00000533915 CCDC174Q6PII3 467 aa16.32■□□□□ 0.2
CMTM1-218ENST00000533915 CPXCR1Q8N123 301 aa16.32■□□□□ 0.2
CMTM1-218ENST00000533915 SHCBP1Q8NEM2 672 aa16.32■□□□□ 0.2
CMTM1-218ENST00000533915 ERO1AQ96HE7 468 aa16.32■□□□□ 0.2
CMTM1-218ENST00000533915 LARP6Q9BRS8 491 aaKnown RBP16.32■□□□□ 0.2
CMTM1-218ENST00000533915 MROH8Q9H579 483 aa16.32■□□□□ 0.2
CMTM1-218ENST00000533915 JMJD4Q9H9V9 463 aa16.32■□□□□ 0.2
CMTM1-218ENST00000533915 BTBD7Q9P203 1132 aa16.32■□□□□ 0.2
CMTM1-218ENST00000533915 FBXO40Q9UH90 709 aa16.32■□□□□ 0.2
CMTM1-218ENST00000533915 PNMA6FA0A0J9YX94 578 aa16.31■□□□□ 0.2
CMTM1-218ENST00000533915 PLEKHA8P1O95397 391 aa16.31■□□□□ 0.2
CMTM1-218ENST00000533915 ADD1P35611 737 aaKnown RBP16.31■□□□□ 0.2
CMTM1-218ENST00000533915 FCGRTP55899 365 aa16.31■□□□□ 0.2
CMTM1-218ENST00000533915 FBXO11Q86XK2 927 aa16.31■□□□□ 0.2
CMTM1-218ENST00000533915 HOMER1Q86YM7 354 aa16.31■□□□□ 0.2
CMTM1-218ENST00000533915 RIOX2Q8IUF8 465 aa16.31■□□□□ 0.2
CMTM1-218ENST00000533915 CCDC82Q8N4S0 544 aa16.31■□□□□ 0.2
CMTM1-218ENST00000533915 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
CMTM1-218ENST00000533915 AMNQ9BXJ7 453 aa16.31■□□□□ 0.2
CMTM1-218ENST00000533915 RAVER2Q9HCJ3 691 aaKnown RBP16.31■□□□□ 0.2
CMTM1-218ENST00000533915 ZNF214Q9UL59 606 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-218ENST00000533915 CCPG1Q9ULG6 757 aa16.31■□□□□ 0.2
CMTM1-218ENST00000533915 IVNS1ABPQ9Y6Y0 642 aa16.31■□□□□ 0.2
CMTM1-218ENST00000533915 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-218ENST00000533915 CNMDO75829 334 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 GNRH1P01148 92 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 IFNAR1P17181 557 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 HOXD10P28358 340 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 CDC27P30260 824 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 SLC4A3P48751 1232 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 LACTBP83111 547 aaPredicted RBP16.3■□□□□ 0.2
CMTM1-218ENST00000533915 QRICH1Q2TAL8 776 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 CHST13Q8NET6 341 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 GTF3C6Q969F1 213 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 CPVLQ9H3G5 476 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 R3HDMLQ9H3Y0 253 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 TXNRD2Q9NNW7 524 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 A0A0G2JMZ2 1700 aa16.3■□□□□ 0.2
CMTM1-218ENST00000533915 ABCB11O95342 1321 aa16.29■□□□□ 0.2
CMTM1-218ENST00000533915 hCG_1984214I3L0E3 225 aa16.29■□□□□ 0.2
CMTM1-218ENST00000533915 STRNO43815 780 aa16.29■□□□□ 0.2
CMTM1-218ENST00000533915 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-218ENST00000533915 SSRP1Q08945 709 aaKnown RBP16.29■□□□□ 0.2
CMTM1-218ENST00000533915 SCRN1Q12765 414 aa16.29■□□□□ 0.2
CMTM1-218ENST00000533915 ME3Q16798 604 aa16.29■□□□□ 0.2
CMTM1-218ENST00000533915 ZNF713Q8N859 430 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-218ENST00000533915 COA7Q96BR5 231 aa16.29■□□□□ 0.2
CMTM1-218ENST00000533915 PIGSQ96S52 555 aa16.29■□□□□ 0.2
CMTM1-218ENST00000533915 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
CMTM1-218ENST00000533915 RNF26Q9BY78 433 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-218ENST00000533915 MAF1Q9H063 256 aa16.29■□□□□ 0.2
CMTM1-218ENST00000533915 NCOA5Q9HCD5 579 aaKnown RBP16.29■□□□□ 0.2
CMTM1-218ENST00000533915 FAM217BQ9NTX9 383 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-218ENST00000533915 TSKSQ9UJT2 592 aa16.29■□□□□ 0.2
CMTM1-218ENST00000533915 MRPL11Q9Y3B7 192 aaKnown RBP16.29■□□□□ 0.2
CMTM1-218ENST00000533915 TNPO2O14787 897 aaKnown RBP16.28■□□□□ 0.2
CMTM1-218ENST00000533915 FOXN1O15353 648 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 PRPF3O43395 683 aaKnown RBP16.28■□□□□ 0.2
CMTM1-218ENST00000533915 CYTH3O43739 400 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 ALAS1P13196 640 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 ERCC3P19447 782 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 SNAP25P60880 206 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 Q3C1V9 767 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 HSCBQ8IWL3 235 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 CMTR1Q8N1G2 835 aaKnown RBP16.28■□□□□ 0.2
CMTM1-218ENST00000533915 ZNF296Q8WUU4 475 aaPredicted RBP16.28■□□□□ 0.2
CMTM1-218ENST00000533915 PIBF1Q8WXW3 757 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 WASF1Q92558 559 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 AGBL1Q96MI9 1066 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 LLPHQ9BRT6 129 aaKnown RBP16.28■□□□□ 0.2
CMTM1-218ENST00000533915 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 ACAD9Q9H845 621 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 PCDHA1Q9Y5I3 950 aa16.28■□□□□ 0.2
CMTM1-218ENST00000533915 V9GY48 417 aaPredicted RBP16.28■□□□□ 0.2
CMTM1-218ENST00000533915 ZNF536O15090 1300 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 CNTNAP5Q8WYK1 1306 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 HSPA8P11142 646 aaKnown RBP16.27■□□□□ 0.2
CMTM1-218ENST00000533915 FCER1AP12319 257 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 PSMC4P43686 418 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 KCTD2Q14681 263 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 USH1GQ495M9 461 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 PLEKHH3Q7Z736 793 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 MCF2L2Q86YR7 1114 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 ABRAQ8N0Z2 381 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 NECAB1Q8N987 351 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 CCDC12Q8WUD4 166 aaPredicted RBP16.27■□□□□ 0.2
CMTM1-218ENST00000533915 SNX21Q969T3 373 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 TRERF1Q96PN7 1200 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 RNF146Q9NTX7 359 aa16.27■□□□□ 0.2
CMTM1-218ENST00000533915 SLC5A4Q9NY91 659 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms