RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 BARGINQ6ZT62 677 aa16.77■□□□□ 0.27
SSH3-210ENST00000532881 CNGA4Q8IV77 575 aa16.77■□□□□ 0.27
SSH3-210ENST00000532881 ADSSL1Q8N142 457 aa16.77■□□□□ 0.27
SSH3-210ENST00000532881 NYXQ9GZU5 481 aa16.77■□□□□ 0.27
SSH3-210ENST00000532881 RTCBQ9Y3I0 505 aaKnown RBP16.77■□□□□ 0.27
SSH3-210ENST00000532881 FRMPD2Q68DX3 1309 aaPredicted RBP16.76■□□□□ 0.27
SSH3-210ENST00000532881 LRRC10BA6NIK2 292 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 PLCG1P19174 1290 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 TRAPPC10P48553 1259 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 DGKHQ86XP1 1220 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 ANKZF1Q9H8Y5 726 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 NRAPQ86VF7 1730 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 SRGAP2O75044 1071 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 CALML3P27482 149 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 NAPAP54920 295 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 STK4Q13043 487 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 CCDC178Q5BJE1 867 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 GPR161Q8N6U8 529 aaKnown RBP16.76■□□□□ 0.27
SSH3-210ENST00000532881 GOLGA1Q92805 767 aa16.76■□□□□ 0.27
SSH3-210ENST00000532881 TXLNAP40222 546 aa16.75■□□□□ 0.27
SSH3-210ENST00000532881 BTDP43251 543 aa16.75■□□□□ 0.27
SSH3-210ENST00000532881 GPSM2P81274 684 aa16.75■□□□□ 0.27
SSH3-210ENST00000532881 PIGSQ96S52 555 aa16.75■□□□□ 0.27
SSH3-210ENST00000532881 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
SSH3-210ENST00000532881 F8W031 263 aaPredicted RBP16.75■□□□□ 0.27
SSH3-210ENST00000532881 KIF20AO95235 890 aa16.75■□□□□ 0.27
SSH3-210ENST00000532881 NOA1Q8NC60 698 aaKnown RBP16.75■□□□□ 0.27
SSH3-210ENST00000532881 DUSP10Q9Y6W6 482 aa16.75■□□□□ 0.27
SSH3-210ENST00000532881 CNTNAP4Q9C0A0 1308 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 SMCO2A6NFE2 343 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 CDK8P49336 464 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 ARL6IP4Q66PJ3 421 aaKnown RBP16.74■□□□□ 0.27
SSH3-210ENST00000532881 WDR59Q6PJI9 974 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 SRGAP1Q7Z6B7 1085 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 MB21D1Q8N884 522 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 CEP95Q96GE4 821 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 EYA3Q99504 573 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 FUT8Q9BYC5 575 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 TNRC6CQ9HCJ0 1690 aaKnown RBP16.74■□□□□ 0.27
SSH3-210ENST00000532881 PALM3A6NDB9 673 aaPredicted RBP16.74■□□□□ 0.27
SSH3-210ENST00000532881 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 OAS2P29728 719 aaKnown RBP16.74■□□□□ 0.27
SSH3-210ENST00000532881 RFC4P35249 363 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 MCM6Q14566 821 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 ANKRD40Q6AI12 368 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 COA7Q96BR5 231 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 NAA15Q9BXJ9 866 aaKnown RBP16.74■□□□□ 0.27
SSH3-210ENST00000532881 RTFDC1Q9BY42 306 aaPredicted RBP16.74■□□□□ 0.27
SSH3-210ENST00000532881 CDC23Q9UJX2 597 aa16.74■□□□□ 0.27
SSH3-210ENST00000532881 COL22A1Q8NFW1 1626 aaPredicted RBP16.73■□□□□ 0.27
SSH3-210ENST00000532881 CTAGE9A4FU28 777 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 RCCD1A6NED2 376 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 RASSF10A6NK89 507 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 TPM1P09493 284 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 TXKP42681 527 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 PICALMQ13492 652 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 LONRF2Q1L5Z9 754 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 POTEDQ86YR6 584 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 NEK11Q8NG66 645 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 DUSP9Q99956 384 aaKnown RBP16.73■□□□□ 0.27
SSH3-210ENST00000532881 LAMB1P07942 1786 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 PDE4DQ08499 809 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 CYP26C1Q6V0L0 522 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 FAM196AQ6ZSG2 479 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 CABP7Q86V35 215 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 RABGGTAQ92696 567 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 ARFGAP3Q9NP61 516 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 SLC39A2Q9NP94 309 aa16.73■□□□□ 0.27
SSH3-210ENST00000532881 EPN1Q9Y6I3 576 aaPredicted RBP16.73■□□□□ 0.27
SSH3-210ENST00000532881 FLT1P17948 1338 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 ITIH6Q6UXX5 1313 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 H3BQF6 201 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 UFL1O94874 794 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 CYP27A1Q02318 531 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 SMC1AQ14683 1233 aaKnown RBP16.72■□□□□ 0.27
SSH3-210ENST00000532881 SPTY2D1Q68D10 685 aaPredicted RBP16.72■□□□□ 0.27
SSH3-210ENST00000532881 DYMQ7RTS9 669 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 TMTC1Q8IUR5 882 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 TEX11Q8IYF3 940 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 LRRC47Q8N1G4 583 aaKnown RBP16.72■□□□□ 0.27
SSH3-210ENST00000532881 TBCKQ8TEA7 893 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 KBTBD4Q9NVX7 518 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 N4BP1O75113 896 aaKnown RBP16.72■□□□□ 0.27
SSH3-210ENST00000532881 NDUFA10O95299 355 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 ATP2B2Q01814 1243 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 CT47A1Q5JQC4 288 aaPredicted RBP16.72■□□□□ 0.27
SSH3-210ENST00000532881 TTI2Q6NXR4 508 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 CSGALNACT2Q8N6G5 542 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 GLIS3Q8NEA6 775 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 CAPZA3Q96KX2 299 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 MXD3Q9BW11 206 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 RMND1Q9NWS8 449 aa16.72■□□□□ 0.27
SSH3-210ENST00000532881 CCDC88AQ3V6T2 1871 aa16.71■□□□□ 0.27
SSH3-210ENST00000532881 H7C1D1 291 aa16.71■□□□□ 0.27
SSH3-210ENST00000532881 BAG3O95817 575 aa16.71■□□□□ 0.27
SSH3-210ENST00000532881 PLEKP08567 350 aaPredicted RBP16.71■□□□□ 0.27
SSH3-210ENST00000532881 HERVK_113P62684 666 aa16.71■□□□□ 0.27
SSH3-210ENST00000532881 ASIC1P78348 528 aa16.71■□□□□ 0.27
SSH3-210ENST00000532881 GRAPQ13588 217 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms