RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 MS4A4AQ96JQ5 239 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 ZIC5Q96T25 663 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
SOX6-213ENST00000530378 PPP1R9AQ9ULJ8 1098 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 KIF3AQ9Y496 699 aa12.3□□□□□ -0.44
SOX6-213ENST00000530378 MYH15Q9Y2K3 1946 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 A0A0G2JMZ2 1700 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 USP17L15C9J2P7 530 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 USP17L13C9JLJ4 530 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 USP17L11C9JVI0 530 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 USP17L18D6R9N7 530 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 USP17L22D6RA61 530 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 USP17L17D6RBQ6 530 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 USP17L19D6RCP7 530 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 USP17L20D6RJB6 530 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 ZBTB48P10074 688 aaPredicted RBP12.29□□□□□ -0.44
SOX6-213ENST00000530378 GTF2A2P52657 109 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 NAPAP54920 295 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
SOX6-213ENST00000530378 USP17L24Q0WX57 530 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 KRT40Q6A162 431 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 GPAT2Q6NUI2 795 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 CATSPERGQ6ZRH7 1159 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 FAM160B2Q86V87 743 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 PROCA1Q8NCQ7 364 aaPredicted RBP12.29□□□□□ -0.44
SOX6-213ENST00000530378 WASF1Q92558 559 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
SOX6-213ENST00000530378 HOMER2Q9NSB8 354 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 AGTPBP1Q9UPW5 1226 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 MTMR6Q9Y217 621 aa12.29□□□□□ -0.44
SOX6-213ENST00000530378 PNMA6FA0A0J9YX94 578 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 UNCXA6NJT0 531 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 SPDYE16A6NNV3 312 aaPredicted RBP12.28□□□□□ -0.44
SOX6-213ENST00000530378 BTBD19C9JJ37 291 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 STXBP3O00186 592 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 SLC10A3P09131 477 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 CYP2C8P10632 490 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 CETPP11597 493 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 PDCP20941 246 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 TRIM29Q14134 588 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 PRPF38AQ8NAV1 312 aaKnown RBP12.28□□□□□ -0.44
SOX6-213ENST00000530378 AGBL1Q96MI9 1066 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 PAGR1Q9BTK6 254 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 ASCC2Q9H1I8 757 aaPredicted RBP12.28□□□□□ -0.44
SOX6-213ENST00000530378 RANBP17Q9H2T7 1088 aaKnown RBP12.28□□□□□ -0.44
SOX6-213ENST00000530378 ZDHHC9Q9Y397 364 aa12.28□□□□□ -0.44
SOX6-213ENST00000530378 CTDP1Q9Y5B0 961 aaPredicted RBP12.28□□□□□ -0.44
SOX6-213ENST00000530378 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.44
SOX6-213ENST00000530378 KIF28PB7ZC32 967 aa12.27□□□□□ -0.44
SOX6-213ENST00000530378 PLS1Q14651 629 aa12.27□□□□□ -0.44
SOX6-213ENST00000530378 FASTKD5Q7L8L6 764 aaKnown RBP12.27□□□□□ -0.44
SOX6-213ENST00000530378 FAM43AQ8N2R8 423 aa12.27□□□□□ -0.44
SOX6-213ENST00000530378 RASGRP4Q8TDF6 673 aa12.27□□□□□ -0.44
SOX6-213ENST00000530378 OXER1Q8TDS5 423 aa12.27□□□□□ -0.44
SOX6-213ENST00000530378 MTMR8Q96EF0 704 aa12.27□□□□□ -0.44
SOX6-213ENST00000530378 P2RX7Q99572 595 aaKnown RBP12.27□□□□□ -0.44
SOX6-213ENST00000530378 CHMP5Q9NZZ3 219 aa12.27□□□□□ -0.44
SOX6-213ENST00000530378 RBM27Q9P2N5 1060 aaKnown RBP12.27□□□□□ -0.44
SOX6-213ENST00000530378 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.44
SOX6-213ENST00000530378 RBBP6Q7Z6E9 1792 aaKnown RBP12.27□□□□□ -0.44
SOX6-213ENST00000530378 TCHHQ07283 1943 aa12.27□□□□□ -0.44
SOX6-213ENST00000530378 PDHXO00330 501 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 VWA5AO00534 786 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 AOC2O75106 756 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 SMARCA1P28370 1054 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 NLRP5P59047 1200 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 COG2Q14746 738 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 FAM173BQ6P4H8 233 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 FBXO11Q86XK2 927 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 FBXO18Q8NFZ0 1043 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 PTPN18Q99952 460 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 BARHL2Q9NY43 387 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 CCPG1Q9ULG6 757 aa12.27□□□□□ -0.45
SOX6-213ENST00000530378 ZNF536O15090 1300 aa12.26□□□□□ -0.45
SOX6-213ENST00000530378 IGF2BP3O00425 579 aaKnown RBP eCLIP12.26□□□□□ -0.45
SOX6-213ENST00000530378 PLA2G6O60733 806 aa12.26□□□□□ -0.45
SOX6-213ENST00000530378 ECM2O94769 699 aaPredicted RBP12.26□□□□□ -0.45
SOX6-213ENST00000530378 ZSCAN22P10073 491 aaPredicted RBP12.26□□□□□ -0.45
SOX6-213ENST00000530378 NR5A1Q13285 461 aa12.26□□□□□ -0.45
SOX6-213ENST00000530378 GNL2Q13823 731 aaKnown RBP12.26□□□□□ -0.45
SOX6-213ENST00000530378 NOM1Q5C9Z4 860 aaKnown RBP12.26□□□□□ -0.45
SOX6-213ENST00000530378 POTEEQ6S8J3 1075 aa12.26□□□□□ -0.45
SOX6-213ENST00000530378 AMNQ9BXJ7 453 aa12.26□□□□□ -0.45
SOX6-213ENST00000530378 SLC38A10Q9HBR0 1119 aa12.26□□□□□ -0.45
SOX6-213ENST00000530378 WDR33Q9C0J8 1336 aaKnown RBP12.26□□□□□ -0.45
SOX6-213ENST00000530378 FAM205CA6NFA0 338 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 ZBED4O75132 1171 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 BRD1O95696 1058 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 MMP1P03956 469 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 ALAS1P13196 640 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 XBP1P17861 261 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 HERVK_113P62684 666 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 TMEM132BQ14DG7 1078 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 UBE2SQ16763 222 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 SNRNP48Q6IEG0 339 aaKnown RBP12.25□□□□□ -0.45
SOX6-213ENST00000530378 DIS3L2Q8IYB7 885 aaKnown RBP12.25□□□□□ -0.45
SOX6-213ENST00000530378 SMCR8Q8TEV9 937 aaPredicted RBP12.25□□□□□ -0.45
SOX6-213ENST00000530378 PGBD1Q96JS3 809 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 CREBZFQ9NS37 354 aa12.25□□□□□ -0.45
SOX6-213ENST00000530378 SMCO2A6NFE2 343 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms