RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 A0A0D9SFI3 127 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 ZNF213O14771 459 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 CNMDO75829 334 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 INHAP05111 366 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 HOXC6P09630 235 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 CCDC129Q6ZRS4 1044 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 MFSD6Q6ZSS7 791 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 SPICE1Q8N0Z3 855 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 CHURC1Q8WUH1 139 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 USP6NLQ92738 828 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 TTC14Q96N46 770 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 SLF1Q9BQI6 1058 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 CDHR5Q9HBB8 845 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 HMX1Q9NP08 348 aaPredicted RBP12.05□□□□□ -0.48
TRIM35-204ENST00000521283 BTBD7Q9P203 1132 aa12.05□□□□□ -0.48
TRIM35-204ENST00000521283 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRIM35-204ENST00000521283 CTDP1Q9Y5B0 961 aaPredicted RBP12.05□□□□□ -0.48
TRIM35-204ENST00000521283 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 ATP2A1O14983 1001 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 RAD21O60216 631 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 RANBP6O60518 1105 aaKnown RBP12.04□□□□□ -0.48
TRIM35-204ENST00000521283 PLA2G6O60733 806 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 PRDM1O75626 825 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 SGPL1O95470 568 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 ZKSCAN1P17029 563 aaPredicted RBP12.04□□□□□ -0.48
TRIM35-204ENST00000521283 OAZ1P54368 228 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 PRSS12P56730 875 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 GRB14Q14449 540 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 MFSD14CQ5VZR4 134 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 CWC27Q6UX04 472 aaKnown RBP12.04□□□□□ -0.48
TRIM35-204ENST00000521283 CENPQQ7L2Z9 268 aaPredicted RBP12.04□□□□□ -0.48
TRIM35-204ENST00000521283 FAM160B2Q86V87 743 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 ANKLE1Q8NAG6 615 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 STAG1Q8WVM7 1258 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 GMCL1Q96IK5 515 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 PORCNQ9H237 461 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 PAK6Q9NQU5 681 aaPredicted RBP12.04□□□□□ -0.48
TRIM35-204ENST00000521283 PNMA2Q9UL42 364 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
TRIM35-204ENST00000521283 C3orf80F5H4A9 247 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 SMIM22K7EJ46 135 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 VWA5AO00534 786 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 FOXP2O15409 715 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 MSCO60682 206 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 ZBED4O75132 1171 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 NDUFB10O96000 172 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 FCER1AP12319 257 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 BMP3P12645 472 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 ELNP15502 786 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 EN2P19622 333 aaPredicted RBP12.03□□□□□ -0.48
TRIM35-204ENST00000521283 CYP2B6P20813 491 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 STAT3P40763 770 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 NOVP48745 357 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 PLS1Q14651 629 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 IMMTQ16891 758 aaKnown RBP12.03□□□□□ -0.48
TRIM35-204ENST00000521283 FAM83BQ5T0W9 1011 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 AKNAD1Q5T1N1 836 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 VPS53Q5VIR6 699 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 WDR78Q5VTH9 848 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 DPP9Q86TI2 863 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 PACS2Q86VP3 889 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 RIOX2Q8IUF8 465 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 STK11IPQ8N1F8 1099 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 U2AF1L4Q8WU68 220 aaKnown RBP12.03□□□□□ -0.48
TRIM35-204ENST00000521283 ESR2Q92731 530 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 MOV10L1Q9BXT6 1211 aaKnown RBP12.03□□□□□ -0.48
TRIM35-204ENST00000521283 TEX13BQ9BXU2 312 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 CNNM2Q9H8M5 875 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 FBXO40Q9UH90 709 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 STX8Q9UNK0 236 aa12.03□□□□□ -0.48
TRIM35-204ENST00000521283 ZNFX1Q9P2E3 1918 aaKnown RBP12.02□□□□□ -0.49
TRIM35-204ENST00000521283 ERCC3P19447 782 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 SLC1A4P43007 532 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 STAT2P52630 851 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 CTDSPL2Q05D32 466 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 MTFR1Q15390 333 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 FAM47AQ5JRC9 791 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 KIAA1755Q5JYT7 1200 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 MAP3K21Q5TCX8 1036 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 OLFML2BQ68BL8 750 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 SLFN13Q68D06 897 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 ZNF589Q86UQ0 364 aaPredicted RBP12.02□□□□□ -0.49
TRIM35-204ENST00000521283 IQCA1Q86XH1 822 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 NCAPG2Q86XI2 1143 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 CLEC10AQ8IUN9 316 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 ATG4CQ96DT6 458 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 HTATIP2Q9BUP3 242 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRIM35-204ENST00000521283 TOMM22Q9NS69 142 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 DIS3Q9Y2L1 958 aaKnown RBP12.02□□□□□ -0.49
TRIM35-204ENST00000521283 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.49
TRIM35-204ENST00000521283 LAMA4Q16363 1823 aa12.02□□□□□ -0.49
TRIM35-204ENST00000521283 TFRCP02786 760 aaKnown RBP12.01□□□□□ -0.49
TRIM35-204ENST00000521283 TOP1P11387 765 aaKnown RBP12.01□□□□□ -0.49
TRIM35-204ENST00000521283 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
TRIM35-204ENST00000521283 KCTD2Q14681 263 aa12.01□□□□□ -0.49
TRIM35-204ENST00000521283 TMEM132BQ14DG7 1078 aa12.01□□□□□ -0.49
TRIM35-204ENST00000521283 PRPF38BQ5VTL8 546 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms