RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 PCDHA11Q9Y5I1 949 aa4.54□□□□□ -1.68
SKP1-203ENST00000517625 BACE2Q9Y5Z0 518 aa4.54□□□□□ -1.68
SKP1-203ENST00000517625 KCNH1O95259 989 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 WNT11O96014 354 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 SYPP08247 313 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 FUT4P22083 530 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 TEKQ02763 1124 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 EGR3Q06889 387 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 PPP2R5DQ14738 602 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 TESK1Q15569 626 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 TAF7LQ5H9L4 462 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 ZMYM1Q5SVZ6 1142 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 GTF2IRD2BQ6EKJ0 949 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 SLC23A3Q6PIS1 610 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 GTF2IRD2Q86UP8 949 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 HOMER1Q86YM7 354 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 KSR1Q8IVT5 923 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 SCUBE1Q8IWY4 988 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 USHBP1Q8N6Y0 703 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 FLCNQ8NFG4 579 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 KCTD13Q8WZ19 329 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 FCRL2Q96LA5 508 aaPredicted RBP4.53□□□□□ -1.68
SKP1-203ENST00000517625 SLC12A9Q9BXP2 914 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 PCMTD2Q9NV79 361 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 TMEM260Q9NX78 707 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 ZNF281Q9Y2X9 895 aa4.53□□□□□ -1.68
SKP1-203ENST00000517625 DIAPH1O60610 1272 aaKnown RBP4.52□□□□□ -1.69
SKP1-203ENST00000517625 CD3EP07766 207 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 SSTR4P31391 388 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 GFRA1P56159 465 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 SUMO1P63165 101 aaKnown RBP4.52□□□□□ -1.69
SKP1-203ENST00000517625 ACBD5Q5T8D3 534 aaPredicted RBP4.52□□□□□ -1.69
SKP1-203ENST00000517625 E4F1Q66K89 784 aaPredicted RBP4.52□□□□□ -1.69
SKP1-203ENST00000517625 GIMAP6Q6P9H5 292 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 JAZF1Q86VZ6 243 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 WFDC3Q8IUB2 231 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 LILRB2Q8N423 598 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 SH3TC2Q8TF17 1288 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 COPS5Q92905 334 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 RNPC3Q96LT9 517 aaKnown RBP4.52□□□□□ -1.69
SKP1-203ENST00000517625 FOXP3Q9BZS1 431 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 TNFRSF10DQ9UBN6 386 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 PFDN2Q9UHV9 154 aa4.52□□□□□ -1.69
SKP1-203ENST00000517625 TRBV23-1A0A0A0MS06 115 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 MEIS1O00470 390 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 FGF10O15520 208 aaPredicted RBP4.51□□□□□ -1.69
SKP1-203ENST00000517625 CLSTN1O94985 981 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 MED26O95402 600 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 SNRPB2P08579 225 aaKnown RBP4.51□□□□□ -1.69
SKP1-203ENST00000517625 CD8BP10966 210 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 PABPC1P11940 636 aaKnown RBP4.51□□□□□ -1.69
SKP1-203ENST00000517625 HSD3B2P26439 372 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 KIR2DL1P43626 348 aaPredicted RBP4.51□□□□□ -1.69
SKP1-203ENST00000517625 KIR2DL2P43627 348 aaPredicted RBP4.51□□□□□ -1.69
SKP1-203ENST00000517625 SEPHS1P49903 392 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 CHRNEQ04844 493 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 ZP2Q05996 745 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 KCNAB2Q13303 367 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 RTP2Q5QGT7 225 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 IQCEQ6IPM2 695 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 SDE2Q6IQ49 451 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 ANKS4BQ8N8V4 417 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 BTN2A2Q8WVV5 523 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 APPBP2Q92624 585 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 FCRL3Q96P31 734 aaPredicted RBP4.51□□□□□ -1.69
SKP1-203ENST00000517625 ALPK1Q96QP1 1244 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 CDC6Q99741 560 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 CARS2Q9HA77 564 aaKnown RBP4.51□□□□□ -1.69
SKP1-203ENST00000517625 PAK6Q9NQU5 681 aaPredicted RBP4.51□□□□□ -1.69
SKP1-203ENST00000517625 TMEM59LQ9UK28 342 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 GPR55Q9Y2T6 319 aaPredicted RBP4.51□□□□□ -1.69
SKP1-203ENST00000517625 PTCH2Q9Y6C5 1203 aa4.51□□□□□ -1.69
SKP1-203ENST00000517625 TMEM82A0PJX8 343 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 C2orf71A6NGG8 1288 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 STXBP3O00186 592 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 CDC45O75419 566 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 TBC1D8O95759 1140 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 GSTM1P09488 218 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 FAM153BP0C7A2 387 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 NAT1P18440 290 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 CORO7P57737 925 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 SCRN1Q12765 414 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 PLEKHG4Q58EX7 1191 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 SLC35F1Q5T1Q4 408 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 ARTNQ5T4W7 220 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 RSPO2Q6UXX9 243 aaPredicted RBP4.5□□□□□ -1.69
SKP1-203ENST00000517625 NSMFQ6X4W1 530 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 C16orf86Q6ZW13 317 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 WAPLQ7Z5K2 1190 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 SPRED2Q7Z698 418 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 NAT16Q8N8M0 369 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 KISS1RQ969F8 398 aaPredicted RBP4.5□□□□□ -1.69
SKP1-203ENST00000517625 MAP6Q96JE9 813 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 PTCHD1Q96NR3 888 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 MMP19Q99542 508 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 ZFYVE21Q9BQ24 234 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 IER2Q9BTL4 223 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 DHRS4Q9BTZ2 278 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 CDADC1Q9BWV3 514 aa4.5□□□□□ -1.69
SKP1-203ENST00000517625 MRPL4Q9BYD3 311 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms