RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 ARID5AQ03989 594 aa8.5□□□□□ -1.05
SCARNA1-201ENST00000517138 ADAT2Q7Z6V5 191 aaKnown RBP8.5□□□□□ -1.05
SCARNA1-201ENST00000517138 NLRX1Q86UT6 975 aa8.5□□□□□ -1.05
SCARNA1-201ENST00000517138 WHRNQ9P202 907 aa8.5□□□□□ -1.05
SCARNA1-201ENST00000517138 NRDCO43847 1150 aa8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 FARP2O94887 1054 aaPredicted RBP8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 CD3EP07766 207 aa8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 SDHBP21912 280 aa8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 RTP1P59025 263 aa8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 GNL2Q13823 731 aaKnown RBP8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 HSF5Q4G112 596 aaPredicted RBP8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 CWF19L1Q69YN2 538 aaKnown RBP8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 C6orf15Q6UXA7 325 aaPredicted RBP8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 FAM53CQ9NYF3 392 aa8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 YBX2Q9Y2T7 364 aaKnown RBP8.49□□□□□ -1.05
SCARNA1-201ENST00000517138 SLC14A2Q15849 920 aa8.48□□□□□ -1.05
SCARNA1-201ENST00000517138 LARP1BQ659C4 914 aaKnown RBP8.48□□□□□ -1.05
SCARNA1-201ENST00000517138 SLCO6A1Q86UG4 719 aa8.48□□□□□ -1.05
SCARNA1-201ENST00000517138 INTS4Q96HW7 963 aaKnown RBP8.48□□□□□ -1.05
SCARNA1-201ENST00000517138 JMJD8Q96S16 334 aa8.48□□□□□ -1.05
SCARNA1-201ENST00000517138 ACTR10Q9NZ32 417 aa8.48□□□□□ -1.05
SCARNA1-201ENST00000517138 CGGBP1Q9UFW8 167 aaPredicted RBP8.48□□□□□ -1.05
SCARNA1-201ENST00000517138 PRKAG3Q9UGI9 489 aa8.48□□□□□ -1.05
SCARNA1-201ENST00000517138 A0A087WZG4 1122 aa8.47□□□□□ -1.05
SCARNA1-201ENST00000517138 DPY19L1Q2PZI1 675 aa8.47□□□□□ -1.05
SCARNA1-201ENST00000517138 GBP3Q9H0R5 595 aa8.47□□□□□ -1.05
SCARNA1-201ENST00000517138 TNFRSF10DQ9UBN6 386 aa8.47□□□□□ -1.05
SCARNA1-201ENST00000517138 DIS3Q9Y2L1 958 aaKnown RBP8.47□□□□□ -1.05
SCARNA1-201ENST00000517138 SF3B6Q9Y3B4 125 aaKnown RBP8.47□□□□□ -1.05
SCARNA1-201ENST00000517138 STXBP3O00186 592 aa8.46□□□□□ -1.06
SCARNA1-201ENST00000517138 FGF10O15520 208 aaPredicted RBP8.46□□□□□ -1.06
SCARNA1-201ENST00000517138 KRT1P04264 644 aa8.46□□□□□ -1.06
SCARNA1-201ENST00000517138 MRM1Q6IN84 353 aaKnown RBP8.46□□□□□ -1.06
SCARNA1-201ENST00000517138 ARHGEF39Q8N4T4 335 aa8.46□□□□□ -1.06
SCARNA1-201ENST00000517138 SLC43A3Q8NBI5 491 aa8.46□□□□□ -1.06
SCARNA1-201ENST00000517138 HNRNPLLQ8WVV9 542 aaKnown RBP8.46□□□□□ -1.06
SCARNA1-201ENST00000517138 CWC22Q9HCG8 908 aaKnown RBP8.46□□□□□ -1.06
SCARNA1-201ENST00000517138 DCP1AQ9NPI6 582 aaPredicted RBP8.46□□□□□ -1.06
SCARNA1-201ENST00000517138 PPM1BO75688 479 aa8.45□□□□□ -1.06
SCARNA1-201ENST00000517138 MSL3P1P0C860 447 aa8.45□□□□□ -1.06
SCARNA1-201ENST00000517138 SNX17Q15036 470 aa8.45□□□□□ -1.06
SCARNA1-201ENST00000517138 GMLQ99445 158 aa8.45□□□□□ -1.06
SCARNA1-201ENST00000517138 SUGT1Q9Y2Z0 365 aa8.45□□□□□ -1.06
SCARNA1-201ENST00000517138 ANKRD34BA5PLL1 514 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 POU4F1Q01851 419 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 ADGRF1Q5T601 910 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 SYDE1Q6ZW31 735 aaPredicted RBP8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 ZNF605Q86T29 641 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 KSR1Q8IVT5 923 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 FAM178BQ8IXR5 827 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 NAT16Q8N8M0 369 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 FAM84AQ96KN4 292 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 SLC6A17Q9H1V8 727 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 EPB41L4BQ9H329 900 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 IMPACTQ9P2X3 320 aa8.44□□□□□ -1.06
SCARNA1-201ENST00000517138 MYOCOSA0A1B0GUC4 107 aa8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 AURKAO14965 403 aa8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 PRKCAP17252 672 aa8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 PDE6BP35913 854 aa8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 NOP2P46087 812 aaKnown RBP8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 NAALADL2Q58DX5 795 aa8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 TNNI3KQ59H18 835 aa8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 CELF2-AS1Q8N7Q2 184 aa8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 RCC1LQ96I51 464 aaKnown RBP8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 PTCHD1Q96NR3 888 aa8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 AKT3Q9Y243 479 aa8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 TAF6LQ9Y6J9 622 aa8.43□□□□□ -1.06
SCARNA1-201ENST00000517138 A0A1W2PQ45 241 aaPredicted RBP8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 A0A1W2PQY0 241 aa8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 TBX1O43435 398 aa8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 KCNH1O95259 989 aa8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 NCAPHQ15003 741 aa8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 LCE3BQ5TA77 95 aa8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 IRF2BP1Q8IU81 584 aa8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 FBXO15Q8NCQ5 510 aaPredicted RBP8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 NUP43Q8NFH3 380 aa8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 MCOLN1Q9GZU1 580 aa8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 ST7Q9NRC1 585 aa8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 EMC9Q9Y3B6 208 aa8.42□□□□□ -1.06
SCARNA1-201ENST00000517138 WTIPA6NIX2 430 aaPredicted RBP8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 DDAH1O94760 285 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 GJB6O95452 261 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 MVKQ03426 396 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 CYP4F3Q08477 520 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 GALNT18Q6P9A2 607 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 ANKS3Q6ZW76 656 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 KRTAP1-3Q8IUG1 177 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 PPP1R14AQ96A00 147 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 APBA2Q99767 749 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 CRTAC1Q9NQ79 661 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 ACSL6Q9UKU0 697 aa8.41□□□□□ -1.06
SCARNA1-201ENST00000517138 C1QTNF9P0C862 333 aa8.4□□□□□ -1.06
SCARNA1-201ENST00000517138 PNLIPP16233 465 aa8.4□□□□□ -1.06
SCARNA1-201ENST00000517138 ENDOUP21128 410 aaKnown RBP8.4□□□□□ -1.06
SCARNA1-201ENST00000517138 ZC3H6P61129 1189 aaKnown RBP8.4□□□□□ -1.06
SCARNA1-201ENST00000517138 AMPD2Q01433 879 aa8.4□□□□□ -1.06
SCARNA1-201ENST00000517138 BVESQ8NE79 360 aa8.4□□□□□ -1.06
SCARNA1-201ENST00000517138 MRGPRX3Q96LB0 322 aa8.4□□□□□ -1.06
SCARNA1-201ENST00000517138 SGPP1Q9BX95 441 aa8.4□□□□□ -1.06
SCARNA1-201ENST00000517138 ZNF552Q9H707 407 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms