RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 GPR55Q9Y2T6 319 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.13-201ENST00000516379 GFRA2O00451 464 aa2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 PLSCR1O15162 318 aa2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 SRGAP3O43295 1099 aa2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 DBHP09172 617 aa2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 LSM12Q3MHD2 195 aaKnown RBP2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 C9orf131Q5VYM1 1079 aa2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 PAQR3Q6TCH7 311 aa2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 MCATQ8IVS2 390 aaKnown RBP2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 LINC00116Q8NCU8 138 aa2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 ENOX1Q8TC92 643 aaKnown RBP2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 GAL3ST3Q96A11 431 aa2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 FCRL2Q96LA5 508 aaPredicted RBP2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 AKAP2Q9Y2D5 859 aa2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 SAMM50Q9Y512 469 aa2.27□□□□□ -2.05
SNORA40.13-201ENST00000516379 A0A1W2PQ45 241 aaPredicted RBP2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 A0A1W2PQY0 241 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 EIF1AYO14602 144 aaKnown RBP2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 CYBBP04839 570 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 RPL13P26373 211 aaKnown RBP2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 PRR5P85299 388 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 DAB2P98082 770 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 DGCR2P98153 550 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 PTH1RQ03431 593 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 CLEC16AQ2KHT3 1053 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 COLEC12Q5KU26 742 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 ZNF362Q5T0B9 420 aaPredicted RBP2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 MRGPRGQ86SM5 289 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 DAGLBQ8NCG7 672 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 C3orf58Q8NDZ4 430 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 SMARCC2Q8TAQ2 1214 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 ZBTB8AQ96BR9 441 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 TCTN2Q96GX1 697 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 IMPACTQ9P2X3 320 aa2.26□□□□□ -2.05
SNORA40.13-201ENST00000516379 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 FKTNO75072 461 aa2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 EPHB4P54760 987 aa2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 PCBP3P57721 371 aaKnown RBP2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 SRPK2P78362 688 aaKnown RBP2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 SMAD4Q13485 552 aaKnown RBP2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 EPHA10Q5JZY3 1008 aa2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 MCTP2Q6DN12 878 aa2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 TXNDC5Q8NBS9 432 aaKnown RBP2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 CYB5D2Q8WUJ1 264 aa2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 LARP4BQ92615 738 aaKnown RBP2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 ACSF2Q96CM8 615 aaPredicted RBP2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 BCO2Q9BYV7 579 aa2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 CSRNP2Q9H175 543 aa2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 ERVK13-1Q9NX77 482 aa2.25□□□□□ -2.05
SNORA40.13-201ENST00000516379 PGRP06401 933 aa2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 CTGFP29279 349 aa2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 PMLP29590 882 aa2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 ADRA1BP35368 520 aa2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 NMIQ13287 307 aaPredicted RBP2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 PRKD1Q15139 912 aaPredicted RBP2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 NRN1LQ496H8 165 aa2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 USP39Q53GS9 565 aaKnown RBP2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 PI16Q6UXB8 463 aa2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 TPTE2Q6XPS3 522 aa2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 ZNF655Q8N720 491 aaPredicted RBP2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 JMJD8Q96S16 334 aa2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 PTPN18Q99952 460 aa2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 PPP4R2Q9NY27 417 aa2.24□□□□□ -2.05
SNORA40.13-201ENST00000516379 U2SURPO15042 1029 aaKnown RBP2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 ATG7O95352 703 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 SYPP08247 313 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 KRT4P19013 534 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 BMP5P22003 454 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 THBS2P35442 1172 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 C21orf58P58505 322 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 PPP2CBP62714 309 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 PPP2CAP67775 309 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 FNDC7Q5VTL7 733 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 PCNX4Q63HM2 1172 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 ZNF627Q7L945 461 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 PLEKHH3Q7Z736 793 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 PROSER2Q86WR7 435 aaPredicted RBP2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 TMEM52Q8NDY8 209 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 CPA5Q8WXQ8 436 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 EXTL1Q92935 676 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 LCORQ96JN0 433 aaPredicted RBP2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 KREMEN1Q96MU8 473 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 ASPNQ9BXN1 380 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 CEP44Q9C0F1 390 aa2.23□□□□□ -2.05
SNORA40.13-201ENST00000516379 SSU72P8A0A1W2PR75 194 aa2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 F8W031 263 aaPredicted RBP2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 SMARCA5O60264 1052 aaPredicted RBP2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 FKBP4Q02790 459 aaKnown RBP eCLIP2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 CACNB2Q08289 660 aaPredicted RBP2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 SF3B2Q13435 895 aaKnown RBP2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 PRR31Q5SQ13 230 aa2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 Q6ZPA2 131 aa2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 ALG3Q92685 438 aa2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 MBD6Q96DN6 1003 aa2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 FAM129BQ96TA1 746 aa2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 MEGF9Q9H1U4 602 aa2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 ADAM30Q9UKF2 790 aa2.22□□□□□ -2.05
SNORA40.13-201ENST00000516379 C9orf118A6NHY6 69 aa2.21□□□□□ -2.06
SNORA40.13-201ENST00000516379 UPK3BL1B0FP48 263 aa2.21□□□□□ -2.06
SNORA40.13-201ENST00000516379 UPK3BL2E5RIL1 263 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms