RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 FFAR3O14843 346 aa7.19□□□□□ -1.26
NEDD4-211ENST00000514893 SLURP1P55000 103 aa7.19□□□□□ -1.26
NEDD4-211ENST00000514893 LRRFIP1Q32MZ4 808 aaKnown RBP7.19□□□□□ -1.26
NEDD4-211ENST00000514893 RPTNQ6XPR3 784 aa7.19□□□□□ -1.26
NEDD4-211ENST00000514893 ATG4CQ96DT6 458 aa7.19□□□□□ -1.26
NEDD4-211ENST00000514893 GPR20Q99678 358 aa7.19□□□□□ -1.26
NEDD4-211ENST00000514893 BDH2Q9BUT1 245 aa7.19□□□□□ -1.26
NEDD4-211ENST00000514893 SUPT16HQ9Y5B9 1047 aaKnown RBP7.19□□□□□ -1.26
NEDD4-211ENST00000514893 PCDHB12Q9Y5F1 795 aa7.19□□□□□ -1.26
NEDD4-211ENST00000514893 MEIS1O00470 390 aa7.18□□□□□ -1.26
NEDD4-211ENST00000514893 POLR2BP30876 1174 aaKnown RBP7.18□□□□□ -1.26
NEDD4-211ENST00000514893 HLA-DQA1Q5Y7H0 255 aa7.18□□□□□ -1.26
NEDD4-211ENST00000514893 FBXL19Q6PCT2 694 aa7.18□□□□□ -1.26
NEDD4-211ENST00000514893 MKRN2Q9H000 416 aaKnown RBP7.18□□□□□ -1.26
NEDD4-211ENST00000514893 PRR13Q9NZ81 148 aa7.18□□□□□ -1.26
NEDD4-211ENST00000514893 IMPACTQ9P2X3 320 aa7.18□□□□□ -1.26
NEDD4-211ENST00000514893 VTI1BQ9UEU0 232 aa7.18□□□□□ -1.26
NEDD4-211ENST00000514893 PALD1Q9ULE6 856 aa7.18□□□□□ -1.26
NEDD4-211ENST00000514893 MINPP1Q9UNW1 487 aa7.18□□□□□ -1.26
NEDD4-211ENST00000514893 ADAMTS20P59510 1910 aa7.18□□□□□ -1.26
NEDD4-211ENST00000514893 A0A1W2PQJ5 194 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 GREM1O60565 184 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 IGFBP6P24592 240 aaPredicted RBP7.17□□□□□ -1.26
NEDD4-211ENST00000514893 RTP5Q14D33 572 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 UBXN11Q5T124 520 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 OVOS1Q6IE37 1185 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 NLRC3Q7RTR2 1065 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 JAMLQ86YT9 394 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 ZNF512BQ96KM6 892 aaPredicted RBP7.17□□□□□ -1.26
NEDD4-211ENST00000514893 KCNQ5Q9NR82 932 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 USP40Q9NVE5 1235 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 GFOD1Q9NXC2 390 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 MYRFQ9Y2G1 1151 aa7.17□□□□□ -1.26
NEDD4-211ENST00000514893 GSNP06396 782 aa7.16□□□□□ -1.26
NEDD4-211ENST00000514893 INSRRP14616 1297 aa7.16□□□□□ -1.26
NEDD4-211ENST00000514893 EIF4A3P38919 411 aaKnown RBP7.16□□□□□ -1.26
NEDD4-211ENST00000514893 AUHQ13825 339 aaKnown RBP7.16□□□□□ -1.26
NEDD4-211ENST00000514893 PLEKHN1Q494U1 663 aaPredicted RBP7.16□□□□□ -1.26
NEDD4-211ENST00000514893 PAQR3Q6TCH7 311 aa7.16□□□□□ -1.26
NEDD4-211ENST00000514893 TMEM52Q8NDY8 209 aa7.16□□□□□ -1.26
NEDD4-211ENST00000514893 JMJD8Q96S16 334 aa7.16□□□□□ -1.26
NEDD4-211ENST00000514893 ANTXR1Q9H6X2 564 aa7.16□□□□□ -1.26
NEDD4-211ENST00000514893 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
NEDD4-211ENST00000514893 KBTBD4Q9NVX7 518 aa7.16□□□□□ -1.26
NEDD4-211ENST00000514893 SUSD2Q9UGT4 822 aa7.16□□□□□ -1.26
NEDD4-211ENST00000514893 K7ESM1 405 aa7.15□□□□□ -1.26
NEDD4-211ENST00000514893 PRICKLE3O43900 615 aaPredicted RBP7.15□□□□□ -1.26
NEDD4-211ENST00000514893 CYBBP04839 570 aa7.15□□□□□ -1.26
NEDD4-211ENST00000514893 CTSKP43235 329 aa7.15□□□□□ -1.26
NEDD4-211ENST00000514893 FOXO4P98177 505 aa7.15□□□□□ -1.26
NEDD4-211ENST00000514893 ZNF200P98182 395 aaPredicted RBP7.15□□□□□ -1.26
NEDD4-211ENST00000514893 MVKQ03426 396 aa7.15□□□□□ -1.26
NEDD4-211ENST00000514893 REXO1Q8N1G1 1221 aaKnown RBP7.15□□□□□ -1.26
NEDD4-211ENST00000514893 NAT16Q8N8M0 369 aa7.15□□□□□ -1.26
NEDD4-211ENST00000514893 DHRS1Q96LJ7 313 aa7.15□□□□□ -1.26
NEDD4-211ENST00000514893 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
NEDD4-211ENST00000514893 LIMS1P48059 325 aa7.14□□□□□ -1.27
NEDD4-211ENST00000514893 CWF19L1Q69YN2 538 aaKnown RBP7.14□□□□□ -1.27
NEDD4-211ENST00000514893 SND1Q7KZF4 910 aaKnown RBP eCLIP7.14□□□□□ -1.27
NEDD4-211ENST00000514893 ERMP1Q7Z2K6 904 aa7.14□□□□□ -1.27
NEDD4-211ENST00000514893 TMEM192Q8IY95 271 aa7.14□□□□□ -1.27
NEDD4-211ENST00000514893 ZNF296Q8WUU4 475 aaPredicted RBP7.14□□□□□ -1.27
NEDD4-211ENST00000514893 DSCC1Q9BVC3 393 aa7.14□□□□□ -1.27
NEDD4-211ENST00000514893 TRAIPQ9BWF2 469 aa7.14□□□□□ -1.27
NEDD4-211ENST00000514893 GSTM1P09488 218 aa7.13□□□□□ -1.27
NEDD4-211ENST00000514893 MSL3P1P0C860 447 aa7.13□□□□□ -1.27
NEDD4-211ENST00000514893 NME1P15531 152 aaKnown RBP7.13□□□□□ -1.27
NEDD4-211ENST00000514893 NOP2P46087 812 aaKnown RBP7.13□□□□□ -1.27
NEDD4-211ENST00000514893 ZNF165P49910 485 aa7.13□□□□□ -1.27
NEDD4-211ENST00000514893 PUM1Q14671 1186 aaKnown RBP eCLIP7.13□□□□□ -1.27
NEDD4-211ENST00000514893 ZNF827Q17R98 1081 aa7.13□□□□□ -1.27
NEDD4-211ENST00000514893 HHIPL2Q6UWX4 724 aa7.13□□□□□ -1.27
NEDD4-211ENST00000514893 RGS22Q8NE09 1264 aa7.13□□□□□ -1.27
NEDD4-211ENST00000514893 SLC6A18Q96N87 628 aa7.13□□□□□ -1.27
NEDD4-211ENST00000514893 FAN1Q9Y2M0 1017 aa7.13□□□□□ -1.27
NEDD4-211ENST00000514893 SRGAP3O43295 1099 aa7.12□□□□□ -1.27
NEDD4-211ENST00000514893 MCM4P33991 863 aa7.12□□□□□ -1.27
NEDD4-211ENST00000514893 CEBPAP49715 358 aaPredicted RBP7.12□□□□□ -1.27
NEDD4-211ENST00000514893 NT5DC1Q5TFE4 455 aa7.12□□□□□ -1.27
NEDD4-211ENST00000514893 BICRALQ6AI39 1079 aa7.12□□□□□ -1.27
NEDD4-211ENST00000514893 CRTC3Q6UUV7 619 aa7.12□□□□□ -1.27
NEDD4-211ENST00000514893 LIPIQ6XZB0 460 aa7.12□□□□□ -1.27
NEDD4-211ENST00000514893 LSRQ86X29 649 aaPredicted RBP7.12□□□□□ -1.27
NEDD4-211ENST00000514893 FNIP1Q8TF40 1166 aa7.12□□□□□ -1.27
NEDD4-211ENST00000514893 RNF38Q9H0F5 515 aa7.12□□□□□ -1.27
NEDD4-211ENST00000514893 PDLIM7Q9NR12 457 aa7.12□□□□□ -1.27
NEDD4-211ENST00000514893 PMF1-BGLAPU3KQ54 211 aa7.12□□□□□ -1.27
NEDD4-211ENST00000514893 TNFRSF10CO14798 259 aa7.11□□□□□ -1.27
NEDD4-211ENST00000514893 NCAM1P13591 858 aa7.11□□□□□ -1.27
NEDD4-211ENST00000514893 CLCQ05315 142 aa7.11□□□□□ -1.27
NEDD4-211ENST00000514893 SEZ6Q53EL9 994 aa7.11□□□□□ -1.27
NEDD4-211ENST00000514893 RTP2Q5QGT7 225 aa7.11□□□□□ -1.27
NEDD4-211ENST00000514893 GK5Q6ZS86 529 aa7.11□□□□□ -1.27
NEDD4-211ENST00000514893 FBXO33Q7Z6M2 555 aa7.11□□□□□ -1.27
NEDD4-211ENST00000514893 COPRSQ9NQ92 184 aa7.11□□□□□ -1.27
NEDD4-211ENST00000514893 DBR1Q9UK59 544 aaKnown RBP7.11□□□□□ -1.27
NEDD4-211ENST00000514893 F8W031 263 aaPredicted RBP7.1□□□□□ -1.27
NEDD4-211ENST00000514893 DBHP09172 617 aa7.1□□□□□ -1.27
NEDD4-211ENST00000514893 VWA3BQ502W6 1294 aa7.1□□□□□ -1.27
NEDD4-211ENST00000514893 INTS3Q68E01 1043 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms