RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SYPP08247 313 aa6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 RPL10P27635 214 aaKnown RBP6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 AXDND1Q5T1B0 1012 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 SOGA3Q5TF21 947 aa6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 KIAA1211LQ6NV74 962 aa6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 SYDE1Q6ZW31 735 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 ARMC5Q96C12 935 aa6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 TOX2Q96NM4 488 aa6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 HIRIP3Q9BW71 556 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 PCGF6Q9BYE7 350 aa6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 KRTAP4-5Q9BYR2 181 aa6.38□□□□□ -1.39
HMGB3P13-201ENST00000511263 LTBP3Q9NS15 1303 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 NOP56O00567 594 aaKnown RBP6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 KIR2DL1P43626 348 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 KIR2DL2P43627 348 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 SNX17Q15036 470 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 LARP1BQ659C4 914 aaKnown RBP6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 DCAF15Q66K64 600 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 WAPLQ7Z5K2 1190 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 MCF2L2Q86YR7 1114 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 USHBP1Q8N6Y0 703 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 NAT16Q8N8M0 369 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 KIRREL1Q96J84 757 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 TRIM55Q9BYV6 548 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 EPN3Q9H201 632 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 KCNK12Q9HB15 430 aa6.37□□□□□ -1.39
HMGB3P13-201ENST00000511263 DDAH1O94760 285 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 GLI1P08151 1106 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 C1QTNF9P0C862 333 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 TEKQ02763 1124 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 SNW1Q13573 536 aaKnown RBP6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 NR0B2Q15466 257 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 SLC14A2Q15849 920 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 TMEM67Q5HYA8 995 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 NBPF6Q5VWK0 638 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 PPFIBP1Q86W92 1011 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 FIBCD1Q8N539 461 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 ABHD4Q8TB40 342 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 MYLIPQ8WY64 445 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 RCC1LQ96I51 464 aaKnown RBP6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 FCRL2Q96LA5 508 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 NBPF4Q96M43 638 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 FOXP3Q9BZS1 431 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 ZNF408Q9H9D4 720 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 TNFRSF10DQ9UBN6 386 aa6.36□□□□□ -1.39
HMGB3P13-201ENST00000511263 TRBV23OR9-2A0A075B6M9 112 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 MEIS1O00470 390 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 ZNF205O95201 554 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 HK2P52789 917 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 GRB10Q13322 594 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 LILRA6Q6PI73 481 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 MPZL3Q6UWV2 235 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 CYP2R1Q6VVX0 501 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 EEPD1Q7L9B9 569 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 FAM169BQ8N8A8 192 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 CDADC1Q9BWV3 514 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 CWC22Q9HCG8 908 aaKnown RBP6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 FAM86C1Q9NVL1 165 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 ZNF451Q9Y4E5 1061 aa6.35□□□□□ -1.39
HMGB3P13-201ENST00000511263 ATAD2BQ9ULI0 1458 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 DNAJC25-GNG10A0A024R161 153 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 TBC1D8O95759 1140 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 HPXP02790 462 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 ZGLP1P0C6A0 271 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 ZSCAN22P10073 491 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 VAV1P15498 845 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 ETFBP38117 255 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 ZNF445P59923 1031 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 AMPD2Q01433 879 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 HLA-DQA1Q5Y7H0 255 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 ANKS3Q6ZW76 656 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 ANKLE2Q86XL3 938 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 FAM178BQ8IXR5 827 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 DIRC2Q96SL1 478 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 PPP1R16BQ96T49 567 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 KLHL25Q9H0H3 589 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 ADAMTS10Q9H324 1103 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 NOL6Q9H6R4 1146 aaKnown RBP6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 LRP2BPQ9P2M1 347 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 PCDHB10Q9UN67 800 aa6.34□□□□□ -1.39
HMGB3P13-201ENST00000511263 SMARCA2P51531 1590 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 MROH2BQ7Z745 1585 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 A0A1W2PQ27 194 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 A0A1W2PQ64 194 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 A0A1W2PQC6 194 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 A0A1W2PQD8 194 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 WTIPA6NIX2 430 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 WASH4PA8MWX3 477 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 SHOXO15266 292 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 FKTNO75072 461 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 EPHX1P07099 455 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 RALGPS1Q5JS13 557 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 BVESQ8NE79 360 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 ZSCAN18Q8TBC5 510 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 BRF1Q92994 677 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 PPP1R14AQ96A00 147 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 AKT3Q9Y243 479 aa6.33□□□□□ -1.4
HMGB3P13-201ENST00000511263 PEG3Q9GZU2 1588 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 A0A1W2PQ45 241 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 456.7 ms