RNA–Protein interactions for RNA: ENST00000509090.1

COL6A4P2-204, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-204ENST00000509090 NAT2P11245 290 aa8.11□□□□□ -1.11
COL6A4P2-204ENST00000509090 ATP2B1P20020 1258 aa8.11□□□□□ -1.11
COL6A4P2-204ENST00000509090 TMEM67Q5HYA8 995 aa8.11□□□□□ -1.11
COL6A4P2-204ENST00000509090 MRM1Q6IN84 353 aaKnown RBP8.11□□□□□ -1.11
COL6A4P2-204ENST00000509090 MCMBPQ9BTE3 642 aa8.11□□□□□ -1.11
COL6A4P2-204ENST00000509090 CDADC1Q9BWV3 514 aa8.11□□□□□ -1.11
COL6A4P2-204ENST00000509090 SUGT1Q9Y2Z0 365 aa8.11□□□□□ -1.11
COL6A4P2-204ENST00000509090 R3HCC1Q9Y3T6 440 aaKnown RBP8.11□□□□□ -1.11
COL6A4P2-204ENST00000509090 VAMP4O75379 141 aa8.1□□□□□ -1.11
COL6A4P2-204ENST00000509090 USP2O75604 605 aaPredicted RBP8.1□□□□□ -1.11
COL6A4P2-204ENST00000509090 GRB10Q13322 594 aa8.1□□□□□ -1.11
COL6A4P2-204ENST00000509090 RAB33AQ14088 237 aa8.1□□□□□ -1.11
COL6A4P2-204ENST00000509090 BVESQ8NE79 360 aa8.1□□□□□ -1.11
COL6A4P2-204ENST00000509090 EMC9Q9Y3B6 208 aa8.1□□□□□ -1.11
COL6A4P2-204ENST00000509090 RNF114Q9Y508 228 aa8.1□□□□□ -1.11
COL6A4P2-204ENST00000509090 FGF10O15520 208 aaPredicted RBP8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 NRDCO43847 1150 aa8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 SUSD5O60279 629 aa8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 PSPNO60542 156 aa8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 CD3EP07766 207 aa8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 IFNGR1P15260 489 aa8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 SNX17Q15036 470 aa8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 DDR2Q16832 855 aa8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 SHISA4Q96DD7 197 aa8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 ST7Q9NRC1 585 aa8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 AKT3Q9Y243 479 aa8.09□□□□□ -1.11
COL6A4P2-204ENST00000509090 AURKAO14965 403 aa8.08□□□□□ -1.12
COL6A4P2-204ENST00000509090 EFEMP2O95967 443 aa8.08□□□□□ -1.12
COL6A4P2-204ENST00000509090 CEP128Q6ZU80 1094 aa8.08□□□□□ -1.12
COL6A4P2-204ENST00000509090 ARMC5Q96C12 935 aa8.08□□□□□ -1.12
COL6A4P2-204ENST00000509090 LIN37Q96GY3 246 aaPredicted RBP8.08□□□□□ -1.12
COL6A4P2-204ENST00000509090 MRGPRX3Q96LB0 322 aa8.08□□□□□ -1.12
COL6A4P2-204ENST00000509090 RNF32Q9H0A6 362 aa8.08□□□□□ -1.12
COL6A4P2-204ENST00000509090 RTP1P59025 263 aa8.07□□□□□ -1.12
COL6A4P2-204ENST00000509090 AMPD2Q01433 879 aa8.07□□□□□ -1.12
COL6A4P2-204ENST00000509090 RBL2Q08999 1139 aa8.07□□□□□ -1.12
COL6A4P2-204ENST00000509090 SLC14A2Q15849 920 aa8.07□□□□□ -1.12
COL6A4P2-204ENST00000509090 RCSD1Q6JBY9 416 aa8.07□□□□□ -1.12
COL6A4P2-204ENST00000509090 SLCO6A1Q86UG4 719 aa8.07□□□□□ -1.12
COL6A4P2-204ENST00000509090 NLRX1Q86UT6 975 aa8.07□□□□□ -1.12
COL6A4P2-204ENST00000509090 CKAP2LQ8IYA6 745 aa8.07□□□□□ -1.12
COL6A4P2-204ENST00000509090 FAM53CQ9NYF3 392 aa8.07□□□□□ -1.12
COL6A4P2-204ENST00000509090 GPR55Q9Y2T6 319 aaPredicted RBP8.07□□□□□ -1.12
COL6A4P2-204ENST00000509090 A0A1W2PQ45 241 aaPredicted RBP8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 A0A1W2PQY0 241 aa8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 DPY19L1Q2PZI1 675 aa8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 HSF5Q4G112 596 aaPredicted RBP8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 POMZP3Q6PJE2 187 aa8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 TRIM59Q8IWR1 403 aa8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 CRACR2BQ8N4Y2 399 aaPredicted RBP8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 PTCHD1Q96NR3 888 aa8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 EPN3Q9H201 632 aa8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 CWC22Q9HCG8 908 aaKnown RBP8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 GPR160Q9UJ42 338 aa8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 YBX2Q9Y2T7 364 aaKnown RBP8.06□□□□□ -1.12
COL6A4P2-204ENST00000509090 WTIPA6NIX2 430 aaPredicted RBP8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 NOP56O00567 594 aaKnown RBP8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 KCNH1O95259 989 aa8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 GTF2F1P35269 517 aaKnown RBP eCLIP8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 SV2CQ496J9 727 aa8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 NBPF6Q5VWK0 638 aa8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 HLA-DQA1Q5Y7H0 255 aa8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 CYP2R1Q6VVX0 501 aa8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 EEPD1Q7L9B9 569 aa8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 NBPF4Q96M43 638 aa8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 PLCD4Q9BRC7 762 aa8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 LGR4Q9BXB1 951 aa8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
COL6A4P2-204ENST00000509090 C2orf71A6NGG8 1288 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 STXBP3O00186 592 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 CAPNS1P04632 268 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 ITGAVP06756 1048 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 SF3A1Q15459 793 aaKnown RBP8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 EEF1DP3Q658K8 133 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 GALNT18Q6P9A2 607 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 ZNF227Q86WZ6 799 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 NAT16Q8N8M0 369 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 JMJD8Q96S16 334 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 HIRIP3Q9BW71 556 aaPredicted RBP8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 TRIM55Q9BYV6 548 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 CRTAC1Q9NQ79 661 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 BACE2Q9Y5Z0 518 aa8.04□□□□□ -1.12
COL6A4P2-204ENST00000509090 TBC1D8O95759 1140 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 GALK1P51570 392 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 KIR3DS1Q14943 382 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 SLC10A6Q3KNW5 377 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 GTF2IRD2BQ6EKJ0 949 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 OGFOD2Q6N063 350 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 MPZL3Q6UWV2 235 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 PRR23BQ6ZRT6 265 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 GTF2IRD2Q86UP8 949 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 COPS5Q92905 334 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 PPP1R14AQ96A00 147 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 NKX2-4Q9H2Z4 354 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 CYP26B1Q9NR63 512 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 ACSL6Q9UKU0 697 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 MSRB2Q9Y3D2 182 aa8.03□□□□□ -1.12
COL6A4P2-204ENST00000509090 LRRC10BA6NIK2 292 aa8.02□□□□□ -1.13
COL6A4P2-204ENST00000509090 TBX1O43435 398 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms